Gene Sfri_2272 details

Gene Information

• Locus tag: Sfri_2272
• ID: 4279184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2718713
• End bp: 2719480
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638135069
• Product: hypothetical protein
• Protein accession: YP_750956
• Protein GI: 114563443

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000140028
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTCAATG AACTGATTAG CACTTTATTA CTGACTGCTC GTGATGTTAT ACCTATCGCG 
ATAATTTTGT TTGGCTTTCA GCTGGGCGTG CTTAAACGTC CAATAAACCA ATGGCGTAAA 
GTATTACTCG GATTTGTTTA TGTGATTATC GGACTCACTT TTTTTCTTGT TGGTTTGCAA 
TTGGCGCTAT TCCCTATCGG TGAGAGCATG GCCAATCAAC TGACCACCAG CGAGTTTTTA 
CACCCTGATG GTGGTAATGA GCCGTATATT TGGCAAGACT ACTTTTGGGT TTATGTGTTT 
GCCGCCGCAA TCGGTTTTAG CACCACCATC GCAGAACCGT CATTAATTGC AGTGGCAATC 
AAAGCCAACC AAGTTTCGGG TGGCACCATT GGCATCCAAG GCCTGCGAAT GTCTGTGGCG 
TTTGGCGTGG CGATTGGGAT TACGTTGGGT TGTTTTCGTA TTGTGGTTGG CGATCCCATT 
CACTATTACA TTATGGCCGG CTATGTGGTG GTGGTCATTC AAACTTTTTA TGCCCCAAAA 
ATGATTGTCC CTTTAGCTTA TGACTCTGGT GGGGTAACCA CCTCAACGGT AACTGTGCCA 
TTAGTTGCGG CATTAGGACT TGGGCTTGCC ACCAATGTTG AAGGCCGTAA TCCATTAATT 
GATGGCTTTG GCTTGATTGC CTTTGCCAGT TTATTTCCGA TGATCACCGT AATGGGTTAC 
GCCCAAGCGG TTGACTATTT ATCCAAACGA AAAGCCACTA AGGAGTAA 

 

Protein sequence

MLNELISTLL LTARDVIPIA IILFGFQLGV LKRPINQWRK VLLGFVYVII GLTFFLVGLQ 
LALFPIGESM ANQLTTSEFL HPDGGNEPYI WQDYFWVYVF AAAIGFSTTI AEPSLIAVAI 
KANQVSGGTI GIQGLRMSVA FGVAIGITLG CFRIVVGDPI HYYIMAGYVV VVIQTFYAPK 
MIVPLAYDSG GVTTSTVTVP LVAALGLGLA TNVEGRNPLI DGFGLIAFAS LFPMITVMGY 
AQAVDYLSKR KATKE