Gene Sfri_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2271 
Symbol 
ID4279183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2717945 
End bp2718682 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content44% 
IMG OID638135068 
Producthypothetical protein 
Protein accessionYP_750955 
Protein GI114563442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00372269 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCA TCACCAAATT GCTCCAAGCG ATGTTAAGTA GCTTCAAAGA CCTTATTCCG 
ATTATCTTAG TGGTCAGTTT TTTTGAAATA TTTGTGCTTC ATCAAGCGCC TGCAGAACTT 
GGATCTATTC TTATTGGCGT GGTGTTTATT GTATTAGGAT TGACCTTTTT TGTATTTGGT 
TTGGAAATGG GTTTATTTCC TATTGGCGAA TCACTTGCTG AAGCATTAGC CCGCAAAGGC 
AGTGTATTTT GGTTAGTTAT TTTCTCATTC TCATTAGGTT TTGGTACCAC ATTAGCAGAA 
CCAGCCCTCA CGGCAGTGGC AAACGAAGCG GCACAGGTTG CCGCTAATGC TGGTGCGATC 
GAGTCAAATA AACAATCCAT GAGCTCCTAT GCGATGGGCT TACGATTAAC CGTCGCGGTC 
TCGGTTGGCC TAGCCATTTT ACTTGGGGTC ATTCGTATTC TTAAGGGATG GCCAATCCAC 
TACCTCATTA TTGGCGGTTA CGTGTTGGTA ATGATCCTCA CCAGCTTTGC ACCTGCCAAC 
ATTATCGGCA TTGCATATGA TTCTGGTGGC GTCACTACAT CGACCATTAC TGTGCCTTTA 
GTGACAGCAC TAGGGGTTGG CCTAGCAAGT GTGATTAAAG GCCGTAATCC GATGGTAGAT 
GGCTTTGGAT TAATTGCTTT TGCAAGCCTT AGTCCAATGA TTTTTGTATT ACTGTACGGC 
ATGGTGTTTT TGCAGTGA
 
Protein sequence
MSAITKLLQA MLSSFKDLIP IILVVSFFEI FVLHQAPAEL GSILIGVVFI VLGLTFFVFG 
LEMGLFPIGE SLAEALARKG SVFWLVIFSF SLGFGTTLAE PALTAVANEA AQVAANAGAI 
ESNKQSMSSY AMGLRLTVAV SVGLAILLGV IRILKGWPIH YLIIGGYVLV MILTSFAPAN 
IIGIAYDSGG VTTSTITVPL VTALGVGLAS VIKGRNPMVD GFGLIAFASL SPMIFVLLYG 
MVFLQ