Gene Sfri_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2252 
Symbol 
ID4279164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2697418 
End bp2698137 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content38% 
IMG OID638135049 
Productarginyl-tRNA-protein transferase 
Protein accessionYP_750936 
Protein GI114563423 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2935] Putative arginyl-tRNA:protein arginylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000157492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTCTA AATCTGTCAG CGTAGGAATA AGCCAGCCTT TTGATTGCAA TTATATTGAA 
GGTAATAAAG AGCAATTGCT GGTGATCCAA GAACCGCAAA TAGACGCGGC GCTGTTTGAA
CAACTTCTAA CGATGGGGTT TCGTCGTAAC GGCAATGCTA TTTACAAACC TCGTTGTCCG
AGCTGCCAAG CTTGTCAGTC TATTAGATTG AATGTTAATG ATTTTATATT ATCAAAACGA
CAAAAACGAA CCTTAAAAAA CAATCAAGAT TTGCATTGGA AAGTCACTCA TACCTCACGG
CCTGAGCACT ATGATTTGTA TCAACGTTAT ATCAATGAAC GTCACAATGA TGGGCCAATG
TTTCCTGCAT CGCCAACCCA ATATGATGAT TTTTTATTAT CGGATTGGTT ACCGCCCATG
TTTATTGAGG TGTTTGATCA AGACCGATTA ATTGGGGTTG CCGTAACCGA TGAAATGATG
AGCAGCTTCT CGGCAATTTA CAGTTATTTT GATCCTGATT ATGCCGACCG TTCATTAGGT
TCGCTGATGA TTTTAATCCA ATGCCAATTA GCAAAATCAT TGGGTAAACG TTTTTTATAT
TTGGGCTATC AAATTGATCA AAATCGGAAA ATGAACTACA AACGCCAATA TCGCCCATAT
CAAATTTTAA CAGCACTCGG TTGGCAAGTT GGTGAAAATC TTACAGCTCT TTCTCGTTAA
 
Protein sequence
MNSKSVSVGI SQPFDCNYIE GNKEQLLVIQ EPQIDAALFE QLLTMGFRRN GNAIYKPRCP 
SCQACQSIRL NVNDFILSKR QKRTLKNNQD LHWKVTHTSR PEHYDLYQRY INERHNDGPM
FPASPTQYDD FLLSDWLPPM FIEVFDQDRL IGVAVTDEMM SSFSAIYSYF DPDYADRSLG
SLMILIQCQL AKSLGKRFLY LGYQIDQNRK MNYKRQYRPY QILTALGWQV GENLTALSR