Gene Sfri_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2128 
Symbol 
ID4279040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2531494 
End bp2532573 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content40% 
IMG OID638134917 
ProductO-methyltransferase, putative 
Protein accessionYP_750812 
Protein GI114563299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.670405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTT ACCAATCCCC AAAAAAAATG TCTGCATTTG ATGCTAAGTT TGAAGCACAA 
AAAATAGCCT TCGCACCGGT AAGCTTTCAA GTCGCTCGTT GCTTAAGTCA ATTTGGCATA
CTCACAAAGA TTGATGGCGC CGGAGACGAA GGTATTAGCT TAATTCAACT GATTCAACAT
GTTGAATTGT CTGAATATGC CATTCACGTA TTGCTCGATA TGGGATTAAG TATGGGCATT
TTTTGGTGTA AAGATGATCG TTATCGACTC GATAAAACAG GTTATTTCTT ACTCCATGAT
GATATGGCCT CAAAAAATCT AAACTTCATC CATTATGTTT GCTATCAAGG CTTGTTTGAC
CTTGACGATT CACTTAAGCA AGGCAAAGCA ATTGGACTTA AACACTTTGG CGATTGGGAC
ACAATTTACC CAGGGCTAAG TCAGCTACCT GAACAAACTA AAAAAAGCTG GTTTGAGTTC
GATCATTACT ATTCAGATCA TGCCTTTGAC AGTTTATTAC CTTTGATTTT CAAGTCAGAT
CCCGCTCATA TTATTGATGT AGGCGGTAAT ACCGGTAAAT GGGCATTTGC CTGCACCCGC
TATAATAAAA ACGTCAACGT CACCATTATG GATTTACCCG GTCAACTTGC TGTGGCAATG
AAAAATGCCC AAGCATGTTT GGTTGCAGAC CGAGTTCATC CGTTTGAAAC AGATTTACTT
GATAACAACA AGCCTTTTTA CCAAGGAGGT GATTTGTATT GGATGAGTCA ATTTTTAGAT
TGTTTTTCTA AACAACAAAT CATCACTATT CTCCAGCGCA CAGTGGCTGC AATGAAACCT
GACAGTGAAC TGTGTATTTT AGAGACGTAT TGGGACCGAC AGCCTCACGA AGCTGGTGCC
TATTGCGTTA ACGCAACCTC TTTGTATTTT ACCGCGATTG CCAATGGCAA TAGCAGGATG
TATCACAGTA AAGATATGCT TAAAATGATC AATGAGGCAG GCTTGTATGT TGATGAAGAC
ATCGACAACA TTGGCCTAGG CCATACTTTA CTCCGCTGTA AATTAAAGCC GATGAATTAA
 
Protein sequence
MSFYQSPKKM SAFDAKFEAQ KIAFAPVSFQ VARCLSQFGI LTKIDGAGDE GISLIQLIQH 
VELSEYAIHV LLDMGLSMGI FWCKDDRYRL DKTGYFLLHD DMASKNLNFI HYVCYQGLFD
LDDSLKQGKA IGLKHFGDWD TIYPGLSQLP EQTKKSWFEF DHYYSDHAFD SLLPLIFKSD
PAHIIDVGGN TGKWAFACTR YNKNVNVTIM DLPGQLAVAM KNAQACLVAD RVHPFETDLL
DNNKPFYQGG DLYWMSQFLD CFSKQQIITI LQRTVAAMKP DSELCILETY WDRQPHEAGA
YCVNATSLYF TAIANGNSRM YHSKDMLKMI NEAGLYVDED IDNIGLGHTL LRCKLKPMN