| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2120 |
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| Symbol | |
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| ID | 4279032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2521906 |
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| End bp | 2523066 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134909 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_750804 |
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| Protein GI | 114563291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000410522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAA TCTTGTTCTT GTTATTGCCT ATCGCTGCCG GTTATGGATG GTACATGGGA
CGACGCAGTA TTCGTCATAG CGATAGCCAG CAGACTAAAA AACTAAGCCG AGATTACTTT
ACTGGGCTTA ACTTTTTACT GTCTAACGAG TCTGACAAAG CGGTTGATTT ATTCATCAGC
ATGCTCGATG TTGATGACGA AACTATCGAC ACCCATCTAT CGTTAGGTTC GTTATTTCGT
AAACGAGGTG AAGTGGATCG TTCTATTCGC ATCCATCAAA ATTTGATTGC TAGGCCTAGC
TTAACCAATG AGCAGCGTGA CATTGCGATG ATGGAGTTAG GTAAAGATTA TATGGCTGCA
GGTTTTTATG ACCGCGCTGA AGAAATCTTT ATAAACTTAG TCAGCCAAGA TGACCACAGT
GAAGAAGCTG AAACACAACT GCTGCTAATC TACCAAGTGA CCAAAGAGTG GCAAAATGCC
ATCGACATCA CTAAACGCTT ACCTCGTAAA CGTCAGCAAG TGCTTAAATG CACCACGGCC
CATTTTTATT GTCAGTTAGC TGATGAAGCC AATAATGACG CTGATAAAAT CAAAAAATTA
CAACAAGCAA TTAAACAAGA CGCCCAATGC GGTCGAGCTT GGTTAACCTT AGCAAAAATG
TATCTTGATG CTGGCCAGTT TGAGTTATGT AAGCAGGCGC TACAAGAGCT AAAAGTGGCA
GATATTAATT TATTTGCCGA TGGTGTTTCA ATTGCAAAGC AAGTTTATCG AGACACCCAA
GATCCAAACG GTTTTCATGA GTTGCTTGCC AAAGCGATTG CTGATGGCGC GGGTGCCAGT
GTGGTTGTTG CATTAGCCGA ACACAAAATT AGCCTCGGCC AGCATCAAAG TGCTGAAACC
ATGATGCTCG ATAATTTATA TCGTCATCCG ACCATGAAAG GCTTTCAGCA TTTAATGAAA
TTACACATTA AACAAGCTGA AGATGGTCAA GCCAAACAAA GTTTGTCTAT GCTTGAGCAA
CTTGTTGAAC AACAAATTAA ATTCCGCCCT AGTTATCGCT GTACCGCCTG TGGTTTTCCC
TCTCACGGTT TATATTGGCA TTGTCCATCG TGTAAACAGT GGGGCAGTAT CAAGCGTATC
AAAGGCCTCG ATGGTGAATA A
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| Protein sequence | MLEILFLLLP IAAGYGWYMG RRSIRHSDSQ QTKKLSRDYF TGLNFLLSNE SDKAVDLFIS
MLDVDDETID THLSLGSLFR KRGEVDRSIR IHQNLIARPS LTNEQRDIAM MELGKDYMAA
GFYDRAEEIF INLVSQDDHS EEAETQLLLI YQVTKEWQNA IDITKRLPRK RQQVLKCTTA
HFYCQLADEA NNDADKIKKL QQAIKQDAQC GRAWLTLAKM YLDAGQFELC KQALQELKVA
DINLFADGVS IAKQVYRDTQ DPNGFHELLA KAIADGAGAS VVVALAEHKI SLGQHQSAET
MMLDNLYRHP TMKGFQHLMK LHIKQAEDGQ AKQSLSMLEQ LVEQQIKFRP SYRCTACGFP
SHGLYWHCPS CKQWGSIKRI KGLDGE
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