Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1987 |
Symbol | |
ID | 4278899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2354543 |
End bp | 2355349 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638134774 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_750671 |
Protein GI | 114563158 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCATT CAAATGCTGT TCTTGTTAGA AATAATGTTA AATTAATCGG TAATGGTAGC AAAACCTTAG TTCTCGCACA TGGGTTTGGT TGCGATCAAA ATATGTGGCG TTTTGTAACC CCAGAACTGA TGAAGCACTT TACTATTGTT CTATTTGATT ATGTTGGTTC AGGTGCTTCC GATATCTCTC AATATAGTAA AAAACGTTAT GGTCAACTTG AAGGATATGC AGAAGACATC ATCGAAATAT GTGATGCTTT ACATTTATCT GACGCCATTT TTATAGGACA TTCCGTTAGT AGTATCATTG GTGCTATTGC TGCAATTCAA AAACCTAAGT TATTTTCTAA GTTGGTAATG GTGTGTCCTT CACCCTGTTT TTTAAATTTC CCTCCTGATT ACTTTGGCGG ATTTGATAAG GAAGACTTAC TCGAATTGTT AAATCTGATG GACAAAAATT ATATTGGCTG GGCAAATTAT TTAGCCCCGT TAGTAATGGG AACAACCAAT TCGGATGAAC TTATTGGTGA GTTATCAGGC AGCTTTTGTT CTACCGACCC TGTTATAGCG AAGAGCTTTG CTGAAGCGAC TTTTTTATCT GATTACCGTT ATCTGCTAAA AGAGATTACA CAACCGTGTT TAATTTTACA AAGTGAAAAT GATGCCCTGG CAGCAACATC TGTTGGTGAG TTTATTGCTA GCGAAATAGC CCATAGTGAA CTTAACATTA TCGCTGCCCA TGGCCATTGT CTGCATATGA CTCACCCTGA AGCAATCTTA AAATCGATAA TGAAATTCGC TAAATGA
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Protein sequence | MSHSNAVLVR NNVKLIGNGS KTLVLAHGFG CDQNMWRFVT PELMKHFTIV LFDYVGSGAS DISQYSKKRY GQLEGYAEDI IEICDALHLS DAIFIGHSVS SIIGAIAAIQ KPKLFSKLVM VCPSPCFLNF PPDYFGGFDK EDLLELLNLM DKNYIGWANY LAPLVMGTTN SDELIGELSG SFCSTDPVIA KSFAEATFLS DYRYLLKEIT QPCLILQSEN DALAATSVGE FIASEIAHSE LNIIAAHGHC LHMTHPEAIL KSIMKFAK
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