| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1942 |
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| Symbol | |
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| ID | 4278854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2304282 |
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| End bp | 2305718 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134726 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_750626 |
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| Protein GI | 114563113 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.134153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAG ATAAACATTT ACAGAGCTGG CAAGAACGTT TCGAAATGGC AGAAGCAATG
CAACCATTGC TTGGCAAGTT GTATCGTAAC CAAGGCATTG AAGTAATGGT ATATGGTAAA
CCATTACTAA ATGCATCAAC CATCGAAATC ATTAAGTCAC ACCGTTTAGT ACGTCGTCAT
GTCGGTGAAA AATTACGTCT TCGTGAAAGT TTCCCATTTG TTGTAGCACT TAGCAAATTA
GCGATTAAAC ATTGCAGAGT GGATATTGGT AAATTAGCGA TTAATTACTG GCGTAATAAC
AAGGATGCGA GCGGTATTGA AGCTTATATG ACACAGGAAT TGTCTGAAGC GGTTAATCAC
GGTGATGATA CCCCGGCTCG CGATGTTGTA CTTTATGGTT TTGGTCGTAT CGGCCGTTTA
CTCGCTCGTT TATTAATAGA ACGTACCGGT AAAAGCAACA AATTGCGTTT GCGTGCCATT
GTATTACGCG GTGGTAAAAA GGGCGATTTA GAGAAACGTG CTAGCTTGTT GCGTCGTGAC
TCGGTACACG GGCCATTTAA TGGCTCTGTC GAAGTTGATG AAGAAAACAA CGCAATCATT
GCTAATGGCA CTTATATTCA GATTATTTAC GCTAACTCGC CTGATCAAGT GGATTACACT
CAGTATGATA TTAAAGATGC GTTAATTGTC GATAATACTG GTATTTGGAA AGATGAAGAG
GGTTTAGGTT TACACCTTAA AAGCCCAGGA GCTTCAAAAG TATTGTTAAC GGCACCTGCT
AAAGGCGCCA TTAAAAATAT CGTCTACGGT GTTAATGAAA ACGATATTCT TGATGAAGAC
ACTATTGTAT CGGCGGCAAG CTGCACCACA AACGCTATTA CGCCAGTATT AAAAGCGGTT
AATGACAAAT ACGTTATTGA AAATGGCCAC GTAGAAACCA TTCACTCGTA TACGAATGAT
CAAAATCTAA TCGATAACTA TCACAGTGCT GATCGTCGTG GTCGCAGTGC ACCGTTAAAC
ATGGTGATTA CTGAAACGGG TGCCGCTAAA GCTGTTGCTA AAGCATTACC TGTTTTAGCG
GGTAAGCTAA CCGGTAACGC TATCCGTGTG CCAACTCCTA ACGTATCAAT GGCGATTATT
AGTGTTAATT TGCAACATGA AACTAATCGC GATGAACTGA ATGAATACTT AAAAGATGTC
GCATTACAGT CTGGATTACA AAATCAAATC GATTTTACCG AATCGACTGA AATTGTATCT
AGCGACTTAG TTGGTTCACG TTATGCCGGA GTTGTTGATT CGCAAGCAAC GATTGCAGAG
GGCAAACGTG CCATTTTATA TGTATGGTAC GACAACGAAT TTGGCTATAG CTGTCAGGTT
GTTGGCGTTA TGCAAAAAAT GCTCGGTTTA ACCACATTAT CGTTACCAAA AAGCTAA
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| Protein sequence | MSADKHLQSW QERFEMAEAM QPLLGKLYRN QGIEVMVYGK PLLNASTIEI IKSHRLVRRH
VGEKLRLRES FPFVVALSKL AIKHCRVDIG KLAINYWRNN KDASGIEAYM TQELSEAVNH
GDDTPARDVV LYGFGRIGRL LARLLIERTG KSNKLRLRAI VLRGGKKGDL EKRASLLRRD
SVHGPFNGSV EVDEENNAII ANGTYIQIIY ANSPDQVDYT QYDIKDALIV DNTGIWKDEE
GLGLHLKSPG ASKVLLTAPA KGAIKNIVYG VNENDILDED TIVSAASCTT NAITPVLKAV
NDKYVIENGH VETIHSYTND QNLIDNYHSA DRRGRSAPLN MVITETGAAK AVAKALPVLA
GKLTGNAIRV PTPNVSMAII SVNLQHETNR DELNEYLKDV ALQSGLQNQI DFTESTEIVS
SDLVGSRYAG VVDSQATIAE GKRAILYVWY DNEFGYSCQV VGVMQKMLGL TTLSLPKS
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