| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1928 |
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| Symbol | |
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| ID | 4278840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2283178 |
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| End bp | 2285880 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134712 |
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| Product | CoA-binding domain-containing protein |
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| Protein accession | YP_750612 |
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| Protein GI | 114563099 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.517585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAC GCAGTATTAA TGCACTCTTT AAACCCACTT CTGTGGCAGT CATTGGCGCA
TCTAACGGCA ATAAACGCGC AGGTAAAGCA GTGATGAAAA ACCTGCTATC AGGCGGTTTT
TCTGGTCCAA TAATGCCTGT GACACCCAAA TACACCGCAG TAATGGGCGT ATTGGCTTAC
CCCAATATTG AAGCATTACC GATCAAACCT GATTTAGCTA TAATTTGTAC CAACGCCCTG
AAAGTGCCCA GTATTGTTGA ACGTTTGGCT CAATTTGGCT GCAAAGTTGC GATTATTATG
GCTTCTGGCA TGGCATCGCA AACTGACGAG CAAGGTAATA ATTTACTGGA ACTCACCAAA
CAGTATGCGA AACGATACGG TATGCGTTTA TTAGGCCCCA ATAGTTTAGG AATGATTTTA
CCGCCTATAG GGCTCAATGC CAGTTTAGCG CACGCAGGAG CCAACGTCGG CAAAATTGCA
TTTGTGTCGC AATCGGCTGC TATTTGCACC ACAGTCCTCG ATTGGGCTAA CAATAAAGGT
ATTGGCTTTT CGTCGTTTAT TTCACTCGGC GATGCCACCG ATATCGACTT TGACGAATTA
CTCGATTATT TGGGCCGCGA CAGTAAAACC AGCGCTATCA TGCTGTATAT CGATTCCATT
AACGAAAAAC GTCACTTTTT ATCAGCCGCC CGCGCTGCCT CACGCAATAA ACCCATCTTT
GTGATTAAAT CAGGGCGCAG CCGTGAAGGA GTACAAGCTG CAATGCTCCA TACTGGTGGT
ATTGGCGGTA ACGATGCCGT TTATGAAGCC GCTTTTAGAC GTGCCGGTAT GTTAAGAGTA
AACGATTTAA TTGAATTATT TGCTGCAGTA GAAAGCCTTG CTCATTCAAC CCCATTAAAA
GGTGAACGAT TAGTTATTAT GAGTAATGGC GGCGGCCCTG CAGTCTTGGC TGCGGATGAG
TTGATTATTA AAGGTGGCAA ACTGGCACAA TTGTCAGAAA AAACCGTGAC AGAACTGAAT
GCTATTTTAC CCAGTACATG GTCACGACAA AATCCTATCG ACATGATTGG TGATTCAGAC
AGCCAACGCT ACGCAGATAC ATTAAAAGTG CTCATGAGCA GTAACGATAC TGACACTATT
TTGGTGCTAC ATTCGCCATC GATATTAGGT GAAAGTGTTG AAATCGCTAA CAGTATTATC
GACACTATCA ATCAACACCC TAATCGCAAT CGAATCAATA TGCTCACCAA TTGGAGCGGT
GAAGACTCAG CTTATTTGGC CCGTAAACGA TTTACCAAAG CAGGCATTCC GACCTATCGA
ACCCCTGAGG GTGCCGTGAG AGCATTTATG CACATGGTCG AATATCGTCG TAACCAAAAG
TTACTCCAAG AAGTACCGCA GTCAATACCC GATAATATTC CGACTGACAG CAAAGCTGCA
CGGCTATTGC TGCAACGCGC CTTGGATAAT GGTCAAACAG TGGTTGAAAC ACATCAAGCT
GTGGATATTT TGCGGGCTTA CGGACTCAAC ACCATTGAAA CCCGCTTTGT AAAAGATGTT
GATGAAGCGG TTAATGTCGC CAACCAAGTG GGTTATCCTG TAGCGTTAAA AGTGCAATCA
CCAGACCTAC TCTATAAATC AGATGTGCAC GGCGTAGTGT TAAATTTAGC TTCTGATGAA
GATGTTAGTC ACGCCGCCCA CTCTATTATT GACAGGGTTC ATCAAATTAA CCCTTCGGCC
AAAATTGATG GATTAATTAT TCAAAAAATG GCGTTAACCG CAGGTGCTCA AGAGATTAGA
GTATCGGTAA TTAATGACCC AGTATTTGGT CCAGCAATCT GTTTAGGTGA AGGTGGCTCT
GAATGGGACC CAACACGCGA TGCCGCGGTT GCACTGCCAC CATTAAACAT GGCACTGGCT
CGCTATATGG TGATTCAAGC ACTTAAAACC CATAAGTTGC GAGACCGTCA TTTGCCACTT
GGTCTCGACA TGAATGCTTT ATGCGTGATG CTGACGCAAA TATCTCACTT AATTATTGAT
TGTCCTGAAA TTGCCGAAGT AGACATTAAT CCTGTGTTGG CCGCGGGGGA AATAATCACC
TTATTAGACG TCAATATGCG TCTTCATGCC ACCCCGCAAG ACAACATTAA CCGTCTGGCC
ATTTTGCCCT ACCCAAAAGA ATTAGAACAA ACTACCACGC TGAAAAATGG ACTCGAGATA
ATGTTGCGTC CCATCTTGCC AGAAGATGAA CCTAAGCACT TAGATTTTGA TAATTCATTA
AGTGATGAAG ACAGATACAA ACGCTATTTT GGGGTGCGCT CACGAATGAC CCATGAAGAA
ATGGCAGTTT TAACGCAAAT TGATTATTCG CGTGAGATGG CGTTTATTGC GACGACAATG
ACAGAGGATG GTGAAGAGCT AACGTTAGGG GCTGTGAGAG CGTCTATCGA CCCTGATAAT
ACCGAAGCTG AGTTTGCTAT GGCTGTTCGC AGTAATTATC AAGGGATTGG CTTAGGCAAG
TTATTACTGG AAAAACTGAT TGCTTACTAT AAAACCAACA ATACACTGTA TTTAACGGGC
TTTACCATGT TTGAAAACCG CAGTATGGCC AACCTCGCCA AGTCACTTGG GTTTACCGTA
TCATTTGATA TGGAAGAACA TTTGATAAAG ATGCACATGG ATTTACAACC AAAAGCGCAA
TAA
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| Protein sequence | MSQRSINALF KPTSVAVIGA SNGNKRAGKA VMKNLLSGGF SGPIMPVTPK YTAVMGVLAY
PNIEALPIKP DLAIICTNAL KVPSIVERLA QFGCKVAIIM ASGMASQTDE QGNNLLELTK
QYAKRYGMRL LGPNSLGMIL PPIGLNASLA HAGANVGKIA FVSQSAAICT TVLDWANNKG
IGFSSFISLG DATDIDFDEL LDYLGRDSKT SAIMLYIDSI NEKRHFLSAA RAASRNKPIF
VIKSGRSREG VQAAMLHTGG IGGNDAVYEA AFRRAGMLRV NDLIELFAAV ESLAHSTPLK
GERLVIMSNG GGPAVLAADE LIIKGGKLAQ LSEKTVTELN AILPSTWSRQ NPIDMIGDSD
SQRYADTLKV LMSSNDTDTI LVLHSPSILG ESVEIANSII DTINQHPNRN RINMLTNWSG
EDSAYLARKR FTKAGIPTYR TPEGAVRAFM HMVEYRRNQK LLQEVPQSIP DNIPTDSKAA
RLLLQRALDN GQTVVETHQA VDILRAYGLN TIETRFVKDV DEAVNVANQV GYPVALKVQS
PDLLYKSDVH GVVLNLASDE DVSHAAHSII DRVHQINPSA KIDGLIIQKM ALTAGAQEIR
VSVINDPVFG PAICLGEGGS EWDPTRDAAV ALPPLNMALA RYMVIQALKT HKLRDRHLPL
GLDMNALCVM LTQISHLIID CPEIAEVDIN PVLAAGEIIT LLDVNMRLHA TPQDNINRLA
ILPYPKELEQ TTTLKNGLEI MLRPILPEDE PKHLDFDNSL SDEDRYKRYF GVRSRMTHEE
MAVLTQIDYS REMAFIATTM TEDGEELTLG AVRASIDPDN TEAEFAMAVR SNYQGIGLGK
LLLEKLIAYY KTNNTLYLTG FTMFENRSMA NLAKSLGFTV SFDMEEHLIK MHMDLQPKAQ
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