| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1863 |
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| Symbol | |
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| ID | 4278323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2203395 |
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| End bp | 2203931 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134646 |
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| Product | glycine cleavage system transcriptional repressor, putative |
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| Protein accession | YP_750549 |
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| Protein GI | 114563036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2716] Glycine cleavage system regulatory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000211112 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAATT ATCTGGTCGT TACGGCAATG GGCGCTGACC GTCCAGGATT AGTAAGTCGT
TTAGCGCGTT TAGCAAGCGA ATGTGATTGC GATATAGTCG ACAGTCGTAT GGCATTATTT
GGTAATGAAT TTACCCTAAT TATGATGATA TCTGGCTCTT GGTCAGCTAT AACAAAAATA
GAAAGTTTAT TACCGGCGCT GAGTGTTGAA CTTGAACTCA TGACCGTCAT GAAGCGAACA
TCCAAACATA CTCCCAAAAA CTTTGTTTCT CGTATTGAAG TGATATTCAA TGGTGAAGAC
CAACGCGGAA CCATGAAGAG CATTACTCAG TTTTTGGCCG AAAGAGGCCT CGACTTAGCG
GCAGTGCGCT CTCACGCTGA TGACAACGAC AACCTTAAAA CTCAGTCTAT TTTATTAGCG
ATCAATATTC CTGATAAAAT CAATCTATTG AAACTTGAAC AAGGTATTCA TGAGCTGGCA
GAGTCTATGT CTCTAGAGTG CACAATTAAG CGTATGCAAG GCATTGCAGC GCCATAA
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| Protein sequence | MTNYLVVTAM GADRPGLVSR LARLASECDC DIVDSRMALF GNEFTLIMMI SGSWSAITKI
ESLLPALSVE LELMTVMKRT SKHTPKNFVS RIEVIFNGED QRGTMKSITQ FLAERGLDLA
AVRSHADDND NLKTQSILLA INIPDKINLL KLEQGIHELA ESMSLECTIK RMQGIAAP
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