| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1862 |
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| Symbol | bcp |
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| ID | 4278322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2202841 |
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| End bp | 2203308 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134645 |
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| Product | thioredoxin-dependent thiol peroxidase |
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| Protein accession | YP_750548 |
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| Protein GI | 114563035 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00027913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACAT TAAACGTTGG TGATACTGCA CCAAACTTTA CCCTGCAAAA CCAAGCAGGC
GAAGCGGTAT CACTGCAAGA CACATTGTCT AAAGGCCCTG TGCTAGTGTA TTTCTACCCT
AAAGCATCAA CTCCTGGTTG CACAGTGCAA GCACAAGGCC TGCGCGATAT CAAAGCACAA
CTTGATGGTT TACACGTGAC CGTATTTGGC ATTAGCCCAG ACCCTGTTGC TAAACTGGCT
AAGTTTGCCG ACAAACAACA GCTCAACTTC GCTTTGCTCA GTGATGAAGA CCATGCGGTT
GCTGATGGTT TTGGCGTATG GGGACAGAAA AAATTCATGG GTAAAATTTA CGATGGCATT
CATCGCTTAA GTTTTATCGT GGGTACAGAT GGCAAAATCA GCCATGTGTT GAATAAATTC
AAAACCAAAG ATCACCACGA AGTGGTTCTG GCCACGTTAG CTGAGTAA
|
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| Protein sequence | MNTLNVGDTA PNFTLQNQAG EAVSLQDTLS KGPVLVYFYP KASTPGCTVQ AQGLRDIKAQ
LDGLHVTVFG ISPDPVAKLA KFADKQQLNF ALLSDEDHAV ADGFGVWGQK KFMGKIYDGI
HRLSFIVGTD GKISHVLNKF KTKDHHEVVL ATLAE
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