| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1825 |
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| Symbol | |
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| ID | 4278093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2153334 |
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| End bp | 2154281 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134610 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750513 |
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| Protein GI | 114563000 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.401328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTATTT TCATCCAATA TATAGATACA TTGAAGTTGG TAAGTATCGG TAAAAACGAT
ATGTATAGTA TTGAACAGCT TGAGGCCTTT GTGGCGACCG TAAAAACGGG ATCATTTTCA
TCTGCAGCAA GAGCGCTTAA TAAAGCACAA TCAGTTATCA GTCAGCATGT GATAAATCTT
GAAATTGACT GTAATAGCGA ACTATTTGAT CGCAGTGGCC GCTATCCTCA ATTGACACCA
GCAGGTAAAA AACTACTGCC CCATGCCCAA GTGTTGCTCA GCCAGCATCA ACGACTGCGC
GATTGCGCCC AAAGTTTAGA CCAACAAGCA ATATCTGAAT TGACGATTGG TTTAGATGAA
GGAATACCTC TACAAAAGCT GTTCAATATT ATTAATGAGC TCGAAGCTAA GTTTCCGACA
ATTACGCTTG AGTTTTTAAC CGCATCAAGC ATCGATATTA TCGATATGAT TGATACTGAG
CGGGCTGTCA CCGGCATTAT TTTCAGCGAG TTAACGATCC CGGCTCACAT CGATTTTGAA
TCTATTGGGT CAATTAAATT TGATATGTAT GTGGCCAGCA CACATCTCTT AGCACAACAG
ATATATGATA ATTTAGCCCA TTTGAAATTG CATCGTCAAC TATTGATACG GTCACGAAAT
ACTAAATCCA GTAGCTTTCA ATTCGCCATT AGCCCAGACG TTTGGTACGC CGACAATTAT
TATATTTTGC TAGAACTTGC ATTGCAGGGC CATGGCTGGT GTTTACTGCC CAATCATATT
GCCAATCACT ACGTGGATAG CGGGCAACTA GTCATGTTAC CGTCTGAATT TAAAGAGATT
GGTTGGCAAG CAAATGTTGA TGTTATTCAA CACCATCGCT ACAGTCACGA ACCGGTGTTT
AAGCAACTCA GACATTCTTT GCGACAATTA CTAACGTATT CAGCATGA
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| Protein sequence | MAIFIQYIDT LKLVSIGKND MYSIEQLEAF VATVKTGSFS SAARALNKAQ SVISQHVINL
EIDCNSELFD RSGRYPQLTP AGKKLLPHAQ VLLSQHQRLR DCAQSLDQQA ISELTIGLDE
GIPLQKLFNI INELEAKFPT ITLEFLTASS IDIIDMIDTE RAVTGIIFSE LTIPAHIDFE
SIGSIKFDMY VASTHLLAQQ IYDNLAHLKL HRQLLIRSRN TKSSSFQFAI SPDVWYADNY
YILLELALQG HGWCLLPNHI ANHYVDSGQL VMLPSEFKEI GWQANVDVIQ HHRYSHEPVF
KQLRHSLRQL LTYSA
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