| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1810 |
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| Symbol | |
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| ID | 4277449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2134885 |
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| End bp | 2135601 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638134595 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_750498 |
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| Protein GI | 114562985 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAATT TCAGTAACCA GGCGATTTTA AACTGGCAAG CCTTTCTAGA ATTAAAAGTG
CAAAACAGTA AAGATAGACG CCTGCATGAT TTCTATCATG CGGGAACTTA TCACAATGAA
ACACCATTAA GTGATATTGA GTTTGTCGCA TTGGATTTTG AAACAACTGG TTTAGATTCA
CAGAAAAACA GCATCATTAG TATTGGCTTA GTGCCATTTA CCTTGCAGCG TATTTTCTGC
CGTAAAGCAA AAAAATGGTA TCTCAACCCT AAAGATAAAT TACAAGAAGA CTCTATTATT
ATTCACGGTA TCACCCACTC TGATTTACAA GATGCGCCTG ATTTACTATT GATTTTAGAG
CAGCTTTTAA ATGAATTAGC CGGTAAAGTC GTGGTAGTGC ATTATCGTCA TATTGAGCGT
GATTTTCTTG ATCATACGCT ACGCATGTTG ATTAATGAAG GCATTGTGTT TCCGGTTATC
GATACCATGC AGATTGAGGC TAATGTACAA CGAGAAAAAT CGCAGGGATT ATTTAATTTC
TTTAAAAGAA AACGCACAGA ATCAATTCGC CTTGCAAATA GTCGTGAACG TTATCATTTG
CCCGCTTATG CCCCTCATGA TGCGTTAACT GATGCCATAG CCACCGCAGA GTTATTGCAG
GCTCAAATTA AATATCATTT TAGTCCCGAC ACTGCGATTA AAAATTTATG GTTATAA
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| Protein sequence | MTNFSNQAIL NWQAFLELKV QNSKDRRLHD FYHAGTYHNE TPLSDIEFVA LDFETTGLDS
QKNSIISIGL VPFTLQRIFC RKAKKWYLNP KDKLQEDSII IHGITHSDLQ DAPDLLLILE
QLLNELAGKV VVVHYRHIER DFLDHTLRML INEGIVFPVI DTMQIEANVQ REKSQGLFNF
FKRKRTESIR LANSRERYHL PAYAPHDALT DAIATAELLQ AQIKYHFSPD TAIKNLWL
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