Gene Sfri_1777 details

Gene Information

• Locus tag: Sfri_1777
• ID: 4277556
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2087427
• End bp: 2089520
• Gene Length: 2094 bp
• Protein Length: 697 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638134561
• Product: alpha-glucosidase
• Protein accession: YP_750465
• Protein GI: 114562952

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.441918
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGCG TTTTATTTAA CGGTGCAAAT CTGCTATCCA CACAGTCACA CTTTGCACTT 
AATGTTATCG CAGTAGCTTG TGCTGTCGCG CTAGCCACCA TTCCCAGTCT CGCTCAAGCT 
AAAACCATTA ATGTCGCCTC GCCTGACAAA CACATCAATA TCAGTTTGAC TGATGATAAT 
GGCCGTCCTG AATACCAAGT AAAATTTAAT GACAATATTG TTATTAATCC AAGTAAATTA 
GGGTTGGTAT TTCAACAGTT AGGTGAATTA GGTACTGATT TCAACATTAA ACATGTGACT 
AACAGCAACG TAGACCAAAC ATGGCAGCAA CCTTGGGGAG AACGTGAAAA AATCCGCGAT 
CATTACAACC GCGTGGTCGC CACCCTAAGT AACGGCAAAA TTGACTTTGA TATCGAATTT 
AAAGCATTTA ATGACGGTAT TGGCTTTCGT TACCTGGTGC CAAAACAAAC CGGGCTGGCT 
AACACACCGA AACTTGATAT TACCGATGAA TTAACTGAAT TTGCCATCCC AGACCCACAA 
CACACAACCG CATGGTGGAT CCCCGGTCGC GGCTGGAACC GATACGAATA TTTATACCGT 
ACAACCTCAC TTGATAAAAT CGACCGAGCC CACACACCTA TGACGTTTAG AACGGCTGAT 
GGCGTGCATT TAAGCATCCA TGAAGCTGCC CTCACCGATT ATGCCGCAAT GGTGCTTAAT 
CAAGGACGTG ACGGTATTTT ACGTGCTGAT TTAACGCCTT GGTCGGACGG TATTCGAGTG 
AAGACTCAAC CTGGCTTTTC AACACCTTGG CGTACGATTC AAATTGCTAA AGATGCCCCA 
GGTTTACTTA ACTCAGACCT GATCCTTAAT CTTAATGAGC CTAATAAATT AGGTGATGTA 
TCTTGGGTGC AACCGGGTAA ATACGTTGGG ATTTGGTGGG GAATGCACCT CAATGAAAAC 
ACCTGGGGAA GCGGCCCTAA GCATGGCGCA ACCACTAGCG AAACTAAGCG TTATATGGAC 
TTTGCCGCCC AATATGGGTT TGATGGGGTA TTGGTTGAAG GTTGGAATGA AGGCTGGGAT 
GGTAGTTGGT TCGATAACGG CGACGTGTTT AGCTTTACTA AAGCTTATCC TGATTTTGAC 
ATTGATGAGA TAACTCAATA TGGACACAGT AAAAATGTCC GTTTAATTGG CCATCATGAA 
ACCTCTGGTT CAGTCACTAA TTACCGAAAT CAAATGAGTG ATGCTTATGA TTTATATCAA 
AAACATGGCG TGACTCAAGT TAAAACCGGT TACGTAGCAG ACGGTGGTGA CATTAAGCGC 
GTTGATGAAA ATGGTATAGT GCGCCATGAA TGGCACGACG GCCAATTTAT GGTTAACGAA 
TATCTACATA GCGTTACCGA AGCCGCAAAA CGTGGTATTA GCATTAATAC TCACGAGCCG 
ATTAAAGATA CCGGTTTACG TCGTACTTAC CCAAATTGGA TAGCACGCGA AGGCGCTCGA 
GGCCAAGAGT TTAATGCATG GGGAAGCCCA CCTAATACTC CAGAACATAC AGCAATTCTA 
CCTTATACCC GGATGCTGGC TGGGCCGATG GACTTCACCC CTGGGATCTT TAATTTAGCG 
CCTGAAGGTC TAGATGCGGT TAACCGCGTA AAAACCACAC TCACAAAGCA ATTAGCCTTG 
TATGTCGTGT TGTACAGCCC TATTCAAATG GCTGCAGACT TACCGCGTAA CTATGTGCAA 
CGTCTCGATG CTTTTCAGTT TATTCAAGAT GTACCGACAG ATTGGAGCGA CAGTATCGCC 
CTTGCGGGTG AAATTGGTGA CTATGTTGCC TTTGCAAGAA AACAGCGCGG TGCTGAAGAC 
TGGTATCTAG GCGCATTAAC AGATGAAGAC TCACGAAAAT TGACGTTAAA ATTAGACTTC 
CTCACGCAGG GGAAACGCTA CCAAGCCGAA ATTTATCGTG ACGGTGATAA AGCTGATTGG 
TTAACTAATC CATATGATTA CGTGATTGAA ACCAAAATCG TTACTGCAAA TGACGCGATG 
ACACTGAACT TAGCAGCCAG TGGGGGTACC GCGATTCGTT TTAAAGCCTT GTAA 

 

Protein sequence

MARVLFNGAN LLSTQSHFAL NVIAVACAVA LATIPSLAQA KTINVASPDK HINISLTDDN 
GRPEYQVKFN DNIVINPSKL GLVFQQLGEL GTDFNIKHVT NSNVDQTWQQ PWGEREKIRD 
HYNRVVATLS NGKIDFDIEF KAFNDGIGFR YLVPKQTGLA NTPKLDITDE LTEFAIPDPQ 
HTTAWWIPGR GWNRYEYLYR TTSLDKIDRA HTPMTFRTAD GVHLSIHEAA LTDYAAMVLN 
QGRDGILRAD LTPWSDGIRV KTQPGFSTPW RTIQIAKDAP GLLNSDLILN LNEPNKLGDV 
SWVQPGKYVG IWWGMHLNEN TWGSGPKHGA TTSETKRYMD FAAQYGFDGV LVEGWNEGWD 
GSWFDNGDVF SFTKAYPDFD IDEITQYGHS KNVRLIGHHE TSGSVTNYRN QMSDAYDLYQ 
KHGVTQVKTG YVADGGDIKR VDENGIVRHE WHDGQFMVNE YLHSVTEAAK RGISINTHEP 
IKDTGLRRTY PNWIAREGAR GQEFNAWGSP PNTPEHTAIL PYTRMLAGPM DFTPGIFNLA 
PEGLDAVNRV KTTLTKQLAL YVVLYSPIQM AADLPRNYVQ RLDAFQFIQD VPTDWSDSIA 
LAGEIGDYVA FARKQRGAED WYLGALTDED SRKLTLKLDF LTQGKRYQAE IYRDGDKADW 
LTNPYDYVIE TKIVTANDAM TLNLAASGGT AIRFKAL