Gene Sfri_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1697 
Symbol 
ID4277723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2002895 
End bp2003728 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content39% 
IMG OID638134482 
Producthypothetical protein 
Protein accessionYP_750386 
Protein GI114562873 
COG category[S] Function unknown 
COG ID[COG2996] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACAAA TCGGTAAACG TTATTCATTA GAAGTTGTTA AACAAGTTAA TTTTGGGGTT 
TATCTAAATG CTCAAGAGCT TGGACAAGTC TTGCTTCCTA ATAAATTTGT CCCTACCGGT
TGTAATGTCG GTGATATGGT AGATGTGTTT CTTTACCTAG ACTCTGAAGA CATTGTGATT
GCAACTACCC AAAAGTCGTT AGCTCAAGTG GGTGAATATG CTTATTTAAA AGTAATCGCC
ACGGGCCCAT TCGGCGCATT TTTAGATTGG GGCTTAGACA AAGATTTATT ACTCCCGTTT
GGTGAGCAAC ATAAACCGGC CGAAGAAGGC CACTCATACT TAGTTTATGT CCATGCTAAC
CATGCCGACG AACGTATTAT GGCATCGTCA AAACTGGATA AGTTTGTCGA TAAAACAGAA
GCGCATTACA CCGAAGGTGA ACAGGTTAAT TTAATCATTG GTGGCACTAC TGAGCTAGGT
TACAAAGCCA TTATTAACAA CCTGCATTGG GGCGTAATTT ACGCTAACGA AGTTTTCCAA
AAATTGCGAT TTGGTCAAAA AGTAACTGGT TATATCAAAA CAATGCGCAG TGATGGCAAA
ATTGATCTTG TGCTGCAAAA AGGTGATAAA GACGAGCTAG ATAAAAATGC CCGTTTGATC
ATTAATAAAT TGCGAAGCGC TAATGGTTTT TTACCACTAC ATGACAAAAC TGATGCTGAT
GTCATTTATG ACAAACTCGG CATGAGTAAA AAAGCCTTTA AGAAATCAAT TGGTGGTTTA
TTTAAAGCAG GTGAGATCAC TATCGAAAGT GAAGGTATTC GCCTAACTGT GTGA
 
Protein sequence
MIQIGKRYSL EVVKQVNFGV YLNAQELGQV LLPNKFVPTG CNVGDMVDVF LYLDSEDIVI 
ATTQKSLAQV GEYAYLKVIA TGPFGAFLDW GLDKDLLLPF GEQHKPAEEG HSYLVYVHAN
HADERIMASS KLDKFVDKTE AHYTEGEQVN LIIGGTTELG YKAIINNLHW GVIYANEVFQ
KLRFGQKVTG YIKTMRSDGK IDLVLQKGDK DELDKNARLI INKLRSANGF LPLHDKTDAD
VIYDKLGMSK KAFKKSIGGL FKAGEITIES EGIRLTV