| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1677 |
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| Symbol | |
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| ID | 4277703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1980993 |
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| End bp | 1982552 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638134462 |
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| Product | phage portal protein, lambda family protein |
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| Protein accession | YP_750366 |
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| Protein GI | 114562853 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA TTAACGATGC ACTATCGTAT TTATCCCCTG GCTGGGCGCT AAAACGACAG
GCAGCCGCAA TGAGTTATCG CAACCTAAAA GGTTACGAAG CAGCCAGCCC AAGCCGAACA
CATAAAGCCA ATAAAGAGGG GCGCGGGGCA AACCAAGCGG TATTTGCAGC AGGTAAAAGC
TTGCGCGAAC AGGCGCGATG GTTAGATGAA AACCACGACC TCAGTATTGG CATTTTAGAC
CGCATGGAAG AACGGGTAAT TGGTGCGCAA GGTATTGTGG TTGAGCCACA GCCCCGCAGC
ATAAGCGGTG AAATACTCGA CGAACTGGCC AATGATATTC AGCGTCGTTT TGCTGCATGG
TCATTAAAGC CTGACGTAAC AGGGCGCTAC ACTCGGCCAG AGCTTGAACG CTTAGTGTTA
CGTACCGCAT TGCGCGACGG TGAAGTATTC GGCCATCAAG TGCGTGGCAA GGTGGCTAAG
TTTGGTCATC CCAACCCGCA AGGCACGCAA TACAGTATTG AAGCGTTAGA GCCTGATTAC
ATTCCGTTTG AACTTAACGA TGTATCAACC CGCGTTCGAC AAGGGTTAGA GGTTAATGGT
TGGGGGCAGG TGGTTAATTA CCATGTGTTG TTTGATCACC CTTCTGACCA AATTGGCTTT
CGCTATAAAA CCAAAATGGT ACCTGCAAGT AACATGCTGC ACCTTGGCAT GTTTAAGCGT
TTGCACCAGC TGCGCGGTAT CAGTATTTTT CACGGCATTT TAACGCGCCT TGGCGACATT
AAAGACTATG AAGAATCTGA ACGGGTAGCC GCTCGTATTG CTGCAGCGTT AGCGTTTTAC
ATCAAACGCG GTGACGCGAG TATGTTTGGC CTAGATGGTG ATGCTAAAGC TGACCGTGAA
ATTAACATTG CACCAGGCAT GACCTTTGAT GATCTCGCTG TTGGTGAAGA CGTCGGCATG
ATTGAGTCCA ATCGCCCCAA CGTGCATTTA GTCGATTTTC GTAATGGCCA GTTAAAAGCC
TGTGCCGCGG GGACCCGCGG TAGTTACTCG AGCATTGCGC GTGACTATCA AGGCAGTTAC
TCAAGCCAGC GCCAAGAGCT GGTTGAGCAA GACGAGTCGA ACCGCATTAT GCAGCAATGG
TTTTGTGCCG GTTGGGCGCG GCCTGCGTTT CGTAACTGGT TGGAAATGGA GTTAATGAAC
AAGCAGGACC CTATCACCCT GCCGCCAGAC CTAGACACCC GCACCTTGTT TGATGCTGTG
TATTACGGCC CCACCATGCC ATGGATTGAC CCCCGCAAAG AATCCCAAGG TTGGGAAATG
ATGATAGCCG GTAATGCCGC AACCGAGGCT GACTGGGCGC GAGCTCGTGG CCGTAACCCA
AGCGAAGTTA AACGACAACG TCAACGTGAG CTGAAGTTTA ACCGCGAAAA CGACATGGTC
ACGGGTAACG ACCCAGAGCC ACAAAACGGA GAAACCCCAA GTGAAAAAGA CAAAACTAAG
TCTAGCCGTG GCCGCCATGA TGCTAATGCC AAGCGCATCA GCGAGCTTGA CCGAGAGTAA
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| Protein sequence | MSIINDALSY LSPGWALKRQ AAAMSYRNLK GYEAASPSRT HKANKEGRGA NQAVFAAGKS
LREQARWLDE NHDLSIGILD RMEERVIGAQ GIVVEPQPRS ISGEILDELA NDIQRRFAAW
SLKPDVTGRY TRPELERLVL RTALRDGEVF GHQVRGKVAK FGHPNPQGTQ YSIEALEPDY
IPFELNDVST RVRQGLEVNG WGQVVNYHVL FDHPSDQIGF RYKTKMVPAS NMLHLGMFKR
LHQLRGISIF HGILTRLGDI KDYEESERVA ARIAAALAFY IKRGDASMFG LDGDAKADRE
INIAPGMTFD DLAVGEDVGM IESNRPNVHL VDFRNGQLKA CAAGTRGSYS SIARDYQGSY
SSQRQELVEQ DESNRIMQQW FCAGWARPAF RNWLEMELMN KQDPITLPPD LDTRTLFDAV
YYGPTMPWID PRKESQGWEM MIAGNAATEA DWARARGRNP SEVKRQRQRE LKFNRENDMV
TGNDPEPQNG ETPSEKDKTK SSRGRHDANA KRISELDRE
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