Gene Sfri_1595 details

Gene Information

• Locus tag: Sfri_1595
• ID: 4277987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 1898271
• End bp: 1901657
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638134380
• Product: hypothetical protein
• Protein accession: YP_750284
• Protein GI: 114562771

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.419311
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCGT TTTTCGCGCA ATTGCGCTCA GCGGTTACAC CGCGCTCTCG TATTCTAAAG 
TTAGCCCTTT ATGGATTTAC TGTTTATCTA TTGGGTTGTG CTGTTCTTGG CGGATTAATT 
CCATATATTG CCAAACAACA AGCACCAACG ATATTAACCG AGCAATTAGG CAGAAACGTT 
ACCCTACAAG ACATTAGTAT CAACCCATTT ACGTTAGAAC TAACGGTATC GGGTTTTGCG 
ATCAATGAGC TTGATAGCCC GAAAACCTTT GCATCATTCG CCACGGCCTA TGGCAACATT 
CAATTATGGC AATCGATCAC ATCTTGGGCG GTAGTGATTG AAGATATCCG TCTACAACAA 
CCCACATTTA GAGTGGCGCG ATCTGAAACA GCAAATCAAC ACTTTGTATT TAACTTCAGT 
GACATTATTA CCCGCCTAAG CCAAAATACC CAGCCAGCGC CAACCAGTAC TGAACCGACT 
ATTATACCGG CGATAAACAT TGCTAACATT CAAATCCAAC AAGGCGTGTT TACCCTAGAC 
GACAACGTCA CAGATACCCA CATTAATTAT CCCAATATCA ATGTGTCATT GGCACAATTC 
AATAGCTTGA GTAGCGCATT AAACGACAAG CAAGACCAAG TAAATCGTTA TAACTTACGC 
ATAGAAGATC AATTCAAAGG CTCGGTCGCA CTGCAAGGAC AATTCCAATT AGCGCCACTG 
GCAATAAAAG GCGATGTTAA GCTGACTGGG ATTGATTTAT CGCGTTACTG GTCTTTTGTT 
GATCAACTGT TTGCGATTAA CTTAGCTGAA GGCACGCTGA GCCTAAACGG ACAGTATGCT 
GTGACTTTAC AAGACAAAAA CTTAGCACCA ATAAGCCATA TCAATGTCAC CAAAGCACAA 
ATAGTGATTA ATCATTTTAA AGCGCTACAT CAGCAAGATG AAAAAATCGC CATTGATGTA 
CTAGCGTTAA ACAACATCGA CCTAGATAGC CACAAAAAGC GCGTTAGCAT TGGTGAGTTC 
CAAACCGAAA AAGGTAATAT CAAACTCAAT ATCACTCCTA CTGGTGCTGA TTTGGTTGCT 
TTATTGCTGC CTAAAGACAC TGAGTTAACA ACTACCGTAG ATACCTCAGA TTTATCTTCT 
ACAGCCTCAA CGACTACCGA ATCTGCTATT ATAGACACGA CAGATTCAGA GACTGCTAAC 
TCAGATGATC CAAAAGCTGA CAGCACAGAT GTGGCTGATA CCATTACTGA TAAAGCCATC 
GAGACAGTGA AAAAAGTCAC CACTGAGCTC AAAACAAAAG CAGCTAGCGA TGCAACTGAA 
AAAACAGATA CAGATGCAGA GCCACTATTA GCGCAGCAAT CACCACCATC AGCGACACAA 
GATGCTACAA AAGAAGCGAC GGCTGAGTCA GGCTCACAAA TTACTCAACA AAATACAGCA 
ATAGCGGCAG ACTCCATCGA GGCTGACTCT CCTTGGTTAG TCACACTAGA CAAAATCAGT 
ATCGCGCAGT ATCAAGTTAA ACTGGGTGAA GGCATTGCCA GTGATAAGAT TATTCTTTGG 
CAAATCGGCC CAATTGACTT CACTACAGGG GTAATAAAAT CAGATCTATC CAGCCCGATT 
GATTATCAAT TTTCGGCTGG AATCAATCAA CAAAGCTTAT TAACATCAAC AGGACAAGTA 
GATGCATTAG CGCAAACGGT GAATGCTGAA ATCGACTTTA GTAATATGTT GTTGTCACGC 
TTACAACCTT ATATTGCTCC TTACATCAAT ATCACTATTG AAGATGGCAT GTTTTCCACT 
AAGGGCATTT TGCATGCAGA CGCTAAAGAC ACGCTAACCT ACTCTGGCAG CGCAAACATC 
AGCCAATTAC ACATTAACGA TAACGTGTTA AAACAACCTT TGCTGACATG GCAAACTATG 
GACATCAACC AGTTATCGTT TGATCGCCAA CAAGCTAACA TTGATATTGA TGAAATAAAC 
GTTGATAAGC TGTTTAGTCG CCTGATTATC TCACCCGACC GCAGCACCAA TATTAGCGAG 
TTAATCAACA CTCCTGCAGA CATAAAACAA ACCACTGCTA GTGTTGAGAC AGATAAAGCT 
GCTGTTAGTC CAAGTAAAGC TGACCAAGCG ACCTTATCGG CAGGTAATCA GCAATCCGTC 
GATGCACCGC AAATGAAGCT CAACATTAAT AAGATTGGCT TTACAGACAG CTCGGCCTTC 
TTTGCAGACA ATTCGTTAAC GCCCAATTTT GCTTCGGGCA TTGAAATGCT TAATGGTCAA 
ATCACCAACT TATCATCAAA CCCAGAAACC ACCGCATCAG TGGATTTAGC CGGCAAAATA 
GACAAATACG CTCCGGTGAC ATTAAAAGGT GATGTTAACC CGTTATTAGC ACAACCTTAC 
CTTGACCTTA ACTTGAACTT TGACAAAGTA GAGCTCACCT CGGTTAACCC TTATTCAGGC 
ACTTATGCTG GTTACTATAT TGATAAAGGC CAACTGTCAT TGGACCTAAC CTACCAGCTC 
AAAAACAATG AATTAGTTGG CAGTAATCAT GTAGTGATTG ATCAACTCGA GCTAGGTAAA 
CGCAGTAACA GTAGTTTAGC AACCAGCCTA CCTGTGACAT TAGCGATAGC ATTATTGCAA 
GACCGACATG GCGTAATTGA TTTAGGCGTT GATGTGTCTG GAGACATTGA TTCTCCTAGC 
TTTAGTTTTG GTAGCATCAT CATTAATGCA TTAGGCAATA TCATAACCAA AGCGGTTACC 
TCACCATTTT CATTCTTAGC TGGCCTTGTG GACAGTGATG AACAAATAGA TAAAATCAGT 
TTTGAGTATG GACGTAGCAA CATCTCACTT AAACAAAAAA GTACTTTAGA TAAACTGGCT 
AAAGCGTTAA TAGACAGGCC GCTACTTAAT CTGAATATTA AAGGCAGTGT TGACTTAATT 
AACGATAAAC AAGCGTTAGC TGAAACCAAA CTGCATAAAC AACTGGCTAA CACTGCTGGG 
ATAAAGTTCA AAGATTTCCC AAAGAGTATA TCTGCCAGTA AATACCCTGC TACGGGGCCG 
TTAGCAGATG CATTGTATCA ATTGGTTGAG CAAGAGTTAT CGCAGGACCC ATTAGACATA 
AAACAAAAGT TACAGCAGAA AAAACCAAAA CTGACTGAAG CAGAGCTCAT TACGCGCTGG 
CACATTGGCT TGTACAATAT GCTTAAAAAT CACCAACAGT TTACTGCAGA TGAATTTGGC 
CTTTTAGCTC AAAAGCGTGC TAAGGCGGTT AAAGCCTATC TCATTGCTCA AACAGAGATT 
GATCCAGGAA AAATATTTGT GCTTGAAAGC CGTATCAACA CAGCAGAAGA TGCCGCTGAA 
GCATTGCTGG AGTTACAAGT AAAATAA 

 

Protein sequence

MNSFFAQLRS AVTPRSRILK LALYGFTVYL LGCAVLGGLI PYIAKQQAPT ILTEQLGRNV 
TLQDISINPF TLELTVSGFA INELDSPKTF ASFATAYGNI QLWQSITSWA VVIEDIRLQQ 
PTFRVARSET ANQHFVFNFS DIITRLSQNT QPAPTSTEPT IIPAINIANI QIQQGVFTLD 
DNVTDTHINY PNINVSLAQF NSLSSALNDK QDQVNRYNLR IEDQFKGSVA LQGQFQLAPL 
AIKGDVKLTG IDLSRYWSFV DQLFAINLAE GTLSLNGQYA VTLQDKNLAP ISHINVTKAQ 
IVINHFKALH QQDEKIAIDV LALNNIDLDS HKKRVSIGEF QTEKGNIKLN ITPTGADLVA 
LLLPKDTELT TTVDTSDLSS TASTTTESAI IDTTDSETAN SDDPKADSTD VADTITDKAI 
ETVKKVTTEL KTKAASDATE KTDTDAEPLL AQQSPPSATQ DATKEATAES GSQITQQNTA 
IAADSIEADS PWLVTLDKIS IAQYQVKLGE GIASDKIILW QIGPIDFTTG VIKSDLSSPI 
DYQFSAGINQ QSLLTSTGQV DALAQTVNAE IDFSNMLLSR LQPYIAPYIN ITIEDGMFST 
KGILHADAKD TLTYSGSANI SQLHINDNVL KQPLLTWQTM DINQLSFDRQ QANIDIDEIN 
VDKLFSRLII SPDRSTNISE LINTPADIKQ TTASVETDKA AVSPSKADQA TLSAGNQQSV 
DAPQMKLNIN KIGFTDSSAF FADNSLTPNF ASGIEMLNGQ ITNLSSNPET TASVDLAGKI 
DKYAPVTLKG DVNPLLAQPY LDLNLNFDKV ELTSVNPYSG TYAGYYIDKG QLSLDLTYQL 
KNNELVGSNH VVIDQLELGK RSNSSLATSL PVTLAIALLQ DRHGVIDLGV DVSGDIDSPS 
FSFGSIIINA LGNIITKAVT SPFSFLAGLV DSDEQIDKIS FEYGRSNISL KQKSTLDKLA 
KALIDRPLLN LNIKGSVDLI NDKQALAETK LHKQLANTAG IKFKDFPKSI SASKYPATGP 
LADALYQLVE QELSQDPLDI KQKLQQKKPK LTEAELITRW HIGLYNMLKN HQQFTADEFG 
LLAQKRAKAV KAYLIAQTEI DPGKIFVLES RINTAEDAAE ALLELQVK