Gene Sfri_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1540 
Symboladk 
ID4277776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1833236 
End bp1833880 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID638134320 
Productadenylate kinase 
Protein accessionYP_750229 
Protein GI114562716 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0563] Adenylate kinase and related kinases 
TIGRFAM ID[TIGR01351] adenylate kinases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0198359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTA TTTTATTGGG TGCCCCAGGT GCCGGTAAAG GTACCCAAGC TCAGTTCATT 
ATGGAACAGT ATGGTATCCC ACAGATCTCA ACTGGTGATA TGTTACGTGC AGCGGTTAAA 
GCTGGTACGC CATTAGGTTT AGAAGCTAAG AAAGTAATGG ATGCAGGTCA ATTAGTTTCG 
GACGATCTTA TCATTGGGTT AGTGAAAGAG CGTATTGCTC AAGAAGATTG CGTTAAAGGT 
TTTTTACTTG ACGGTTTCCC TCGCACAATT CCTCAAGCTG ATGCTATGGC TGAAAATGGT 
ATTGAGATTG ATCATGTTAT CGAAATCGAT GTGCCGGATG AAGAAATCGT TAAGCGTATG 
AGCGGGCGTC GTGTTCATTC TGGTTCTGGT CGTGTTTACC ACGTGGTGTT CAATCCACCT 
AAAGTGGAAG GTAAAGACGA TGTCACTGGC GAAGATTTAT CTATCCGTCC AGATGACGAA 
GAAAGTACCG TACGTAAGCG TTTAGGTATT TATCACGAGC AAACTAAGCC ATTAGTTGAT 
TATTATGGCA AAGTCGCTGC TGAAGGTCGT ACTCAGTACA ATAAGTTTGA CGGTACTCAG 
TCAGTAACTA AAGTGAGTGA GCAACTAGCC AGCGTATTAA AATAA
 
Protein sequence
MRIILLGAPG AGKGTQAQFI MEQYGIPQIS TGDMLRAAVK AGTPLGLEAK KVMDAGQLVS 
DDLIIGLVKE RIAQEDCVKG FLLDGFPRTI PQADAMAENG IEIDHVIEID VPDEEIVKRM 
SGRRVHSGSG RVYHVVFNPP KVEGKDDVTG EDLSIRPDDE ESTVRKRLGI YHEQTKPLVD 
YYGKVAAEGR TQYNKFDGTQ SVTKVSEQLA SVLK