Gene Sfri_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1530 
Symbol 
ID4277485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1823004 
End bp1823849 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content36% 
IMG OID638134310 
Producthypothetical protein 
Protein accessionYP_750219 
Protein GI114562706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAAAA AATTGATTAT CCTACTGTTT AGTTGCCTAC TTTTTGTTGG CTGCTCAACC 
AAAATAAGTT ATTTTTTTCT GGATTGGGCA ATAGAGTGGG AAGTTGAAGA ATACGTAGAG
TTAACCTCAG ATCAGCAAGA CAAATTTGAT GTCATTATTG AATCGTTTTT AGTTTGGCAT
CGCGAACAAG AATTGCCGCG GTATCGTGAT CAACTGTCTT TGTTATCAAC ACTGACAAAT
CAACAAACAA TGACCCCAGA GCTATGGCTT AATCAAGTGT CAATGGCAAA GGCACATTGG
CACCGTATTT TTGATTTTGT CATGCCTGAG CTGTTACCCA TTATGGCGAG TTTATCCGAT
GAACAAGTTA ATCAGGTACT GGTGCAGCTT AAAAAAGAAC AACAAGAATT AATTGAAGAA
TATGCCGGTA AAGATCAAGC TGAATTGATA AAAGACTCCG ATAAAAGAAT TGCCAAACAA
TTATCTGAAT GGACTGGCGA CGCTACAGAT GAACAAAAAA GTATTATTCA CCAAGCTAAT
ACAGAACGTT TAGCCACGTT AGACATGTGG CTTGAGTATC GCCATGAATG GCTAAGTCAA
TTTGAACAAG CACTGAAACG CCGTCAGCAA ACTGACTACT TTACCCAACA AATGAAGTTG
TTAATGATCT CGCCTGACGA GCTAAAATCT AAAGTTTATC GCGATAATGT AGATGAAAAT
ACTCGAAAGT TTGGTTCAAT GTTAATTGCG CTTAATAAAA CATTTAGTCA AAAACAACGA
AAGTACTTTG ACAAAAAATT AGCTGAATTA GTAGAAGATT TAACTGAACT ACACTTAGAC
AAATAA
 
Protein sequence
MSKKLIILLF SCLLFVGCST KISYFFLDWA IEWEVEEYVE LTSDQQDKFD VIIESFLVWH 
REQELPRYRD QLSLLSTLTN QQTMTPELWL NQVSMAKAHW HRIFDFVMPE LLPIMASLSD
EQVNQVLVQL KKEQQELIEE YAGKDQAELI KDSDKRIAKQ LSEWTGDATD EQKSIIHQAN
TERLATLDMW LEYRHEWLSQ FEQALKRRQQ TDYFTQQMKL LMISPDELKS KVYRDNVDEN
TRKFGSMLIA LNKTFSQKQR KYFDKKLAEL VEDLTELHLD K