| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1522 |
|---|
| Symbol | |
|---|
| ID | 4277477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1816630 |
|---|
| End bp | 1816983 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638134302 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_750211 |
|---|
| Protein GI | 114562698 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAG AAACCATATT TAGCAAAATT ATCCGCCGTG AAATTCCAGC GGATATTTTA
TACCAAGATG AATTAGTCAC CGCATTTCGG GATATTACTC CGCAAGCTCC TACGCATATT
TTGATTATCC CTAATCATTT AATCGCGACA GCAAATGATG TTAAAGCGTC TGATGAAAAA
GCATTAGGAC GAATGATAAC AGTAGCTGCC AAACTTGCTG ATGAAGCCGG TATTGCAGAA
GGCGGTTATC GCTTAATAAT GAATTGCAAT AAACATGGCG GTCAAGAGGT GTACCATATT
CATATGCATC TTTTAGGGGG TAAACCATTA GGCCCAATGT TGAGTCGTGG ATAA
|
|---|
| Protein sequence | MAEETIFSKI IRREIPADIL YQDELVTAFR DITPQAPTHI LIIPNHLIAT ANDVKASDEK
ALGRMITVAA KLADEAGIAE GGYRLIMNCN KHGGQEVYHI HMHLLGGKPL GPMLSRG
|
|---|
| |