Gene Sfri_1512 details

Gene Information

• Locus tag: Sfri_1512
• ID: 4277467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1804524
• End bp: 1806314
• Gene Length: 1791 bp
• Protein Length: 596 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638134292
• Product: serine/threonine protein kinase
• Protein accession: YP_750201
• Protein GI: 114562688
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase; [COG0631] Serine/threonine protein phosphatase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATCTG AGGTTGTAGC GTTAGTTAAC CCAAATACCG AAGCGGCATT GCCCTTCGCT 
ACAACCTTGC AACTGGTTGT CGGTCAAGCA ACAGAAAAAG GCCGTAAATC ACAAAATGAA 
GATGCCATCG GTATTCGTAT TCCATCTGGC TTAGCACTGA TAACCAAAGG TGTCGTAAGT 
GTTATCAGCG ATGGCGTCAG TACAGCTGAA GGCGGTGCGC ATGCTTCAGC CATTAGTGTG 
AGTAACTTTC TTGCGGATTA CTATTCCACC CCTGAAAGCT GGGGTGTGCA AACATCGAGT 
TCCAAAGTAT TAACGGCTTT GAATCGTTGG TTGTACGGAT TAGGACAAGA TTATCGTGAT 
GCAAGGCGTG GCTTTGTATG TACTTTTAGT GCACTGGTAT TTAAGTCTTG TTCTGTACAC 
ATGTTGCACG TGGGGGATTC GCGAATTTAT CGCTTTAGGC ACGGAGAATT ACTGCAATTA 
ACCCACGACC ACAGCACGAA TATCAATTCA TCAAACCAAT ACCTCACTCG CGCATTAGGG 
ATGGACGTTA ACTTAGATGT TGATTACAAA ACCTTATCGG TAGAAGTCGA TGATGTGTAT 
TTAATGACTA CCGATGGCGT ACATGACGTA CTCACTGAAT TTGAAATACA CCAAAAACTG 
ACGGTTCTTT GTCAGCAACA TTCAACGCTT AGTGATGATT TGTGTGAGCA ATTTTGCTTA 
ATGTTAAACA AAAAGGCGTT TGATTTAGGC AGTAAAGATA ACCTCAGTTC GCAGTTATTA 
AGTGTTAGCC AGTTGCCGAA ACAAGCTATC GATGATGTTT ACCAAAGCTT GTCGAGTCAA 
CCGTTTCCAC CACCATTGAG CGTTGGAATG AAGTTAGACG GTTATCAGGT AACCCATACA 
CTTCATCAAT CACAACGCAG CCAGGTTTAT CGAGTCGTCA ATGACCAAGG CGAAGCTTTT 
TGTATGAAAA CCCCTTCAGT TAATTACATT GATGATGCCG CTTACATAGA ACGTTTTATG 
TTAGAAAGCT GGATAGGACA ACGTATCAAC AGTACTCATG TGGTTAAGGT TGTCGAACTG 
CAAAAAATAA AGTCTGCTTT GTACTATGTT ACTGAATTTT TATCGGGAAT AAGCCTAGGT 
GAATGGTTAA CCCAACATAA AAAAGCCCCA GTAGAAGAGG TTTTATTACT GCTAAAACAA 
ATTGAATTAG GGATCAGAGC CTTTCATCGG CGTGAAACGC TGCATCAAGA TTTGAAACCG 
GATAATATTT TTATCACCCG AGAAGGGGTA GTTAAAATCA TCGATTTTGG TTCTTGTTAT 
ATTAAAGGCG TAGCAGAAAT TAGTAGTCCG TTAACTCGAG ATCGTATTTT GGGTACAGCC 
GATTACACCG CTCCTGAAGT TATCTTGGGT TATCAAGCCG ATGGCCGTGC CGATTTGTTT 
TCGCTTGCTG TGATTGCTTT TGAGATGTTG GCAGGACAAT TGCCCTTTAA AGGCAAACTT 
GAGAAATGTC GAACGCGGCA GGATTATCAA CGTTTAGACT ACATTAGTGT GCACCAATTA 
AACCCAATGG TGCCAGAGTG GATGGATAAC GCATTAAAAA AAGCCCTTAA TATTGATCCT 
AATCTACGCC AAGCAGACAC CTGTGAGCTT ATTCATCAAT TAACTACCGC CAAAGCTAAT 
CAAACAGTAA AAGATTTTGT TCCTCTTATC GCCCGTAACC CTGTGCGTTT TTGGCAAGTG 
ATTTCAATCG CGTTGTTCTT ATGTTTAGTG GCTTCTTTAT TGAATAATTG A 

 

Protein sequence

MASEVVALVN PNTEAALPFA TTLQLVVGQA TEKGRKSQNE DAIGIRIPSG LALITKGVVS 
VISDGVSTAE GGAHASAISV SNFLADYYST PESWGVQTSS SKVLTALNRW LYGLGQDYRD 
ARRGFVCTFS ALVFKSCSVH MLHVGDSRIY RFRHGELLQL THDHSTNINS SNQYLTRALG 
MDVNLDVDYK TLSVEVDDVY LMTTDGVHDV LTEFEIHQKL TVLCQQHSTL SDDLCEQFCL 
MLNKKAFDLG SKDNLSSQLL SVSQLPKQAI DDVYQSLSSQ PFPPPLSVGM KLDGYQVTHT 
LHQSQRSQVY RVVNDQGEAF CMKTPSVNYI DDAAYIERFM LESWIGQRIN STHVVKVVEL 
QKIKSALYYV TEFLSGISLG EWLTQHKKAP VEEVLLLLKQ IELGIRAFHR RETLHQDLKP 
DNIFITREGV VKIIDFGSCY IKGVAEISSP LTRDRILGTA DYTAPEVILG YQADGRADLF 
SLAVIAFEML AGQLPFKGKL EKCRTRQDYQ RLDYISVHQL NPMVPEWMDN ALKKALNIDP 
NLRQADTCEL IHQLTTAKAN QTVKDFVPLI ARNPVRFWQV ISIALFLCLV ASLLNN