Gene Sfri_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1449 
Symbol 
ID4278453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1733168 
End bp1733947 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content40% 
IMG OID638134224 
Producthypothetical protein 
Protein accessionYP_750139 
Protein GI114562626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000835814 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTAA TTTTGGTATT AATTCTTATT GGTGCATTAT TATTGCTGAT TATCGGCTTT 
AGTATTGTCC AACAACAAAA AGAGCGAGCA GAAGCTGAAC GTCGAGTAGA AGCATCTCGC
CAGCGCGCCA TCATAGATGA AACTGATGCC GTATTATCCA ACACTGGCAT GACCCCATCT
TCTAGCCACA TTATGTTAGT ACTATATCGA CGCATTCAAG ATGCTTTAGA ACAATCTGTT
GTCCATGCAT CAGGCCAATT AAAATCGGAT TATGAGCGTC GCCTAGGTGA CATTAAAATG
CAAATAGCCA CAGTGTCTAA TTCACCAAGC CAAGTCCCTG CGATTGAGAA CTTTCGTTTA
CCTGATAATG ATAGGCAAGT TTTAGAATTA GTAAAAACAC TTAAGAAGCT CAAAGCCATT
TTACGTGCTG AACATAATAA GGGAAAAGTG GATCCGTCTA TTTTTGCACA AGAAGAAATG
CGTATCGACA ATCTGCAATT AAGAATTAAT GTTGATTCTA TGATTAGCCG AGCTCGTGCA
GCTTGCTTTA TGAAGCAGTA CGGTTCTAGT AAACAAATGG TCACAAAAGC ATTAAACACG
CTCCACACGA TTAAAGCGCA GACGCCCAAT GATCCTTTTA TTGCTCGTAA AGTCGATGAA
GCTAAGCAGT TACTCGATGA AATCATGGGT GCTCAAAAAC ACAGTGAACC GAGTGCACCA
AAACCGAAAA AAGAAGGTGA TGATCTTGAT ATGTTGTTTC AGCCAAAAAA GAAATGGTAA
 
Protein sequence
MSLILVLILI GALLLLIIGF SIVQQQKERA EAERRVEASR QRAIIDETDA VLSNTGMTPS 
SSHIMLVLYR RIQDALEQSV VHASGQLKSD YERRLGDIKM QIATVSNSPS QVPAIENFRL
PDNDRQVLEL VKTLKKLKAI LRAEHNKGKV DPSIFAQEEM RIDNLQLRIN VDSMISRARA
ACFMKQYGSS KQMVTKALNT LHTIKAQTPN DPFIARKVDE AKQLLDEIMG AQKHSEPSAP
KPKKEGDDLD MLFQPKKKW