Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1449 |
Symbol | |
ID | 4278453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1733168 |
End bp | 1733947 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638134224 |
Product | hypothetical protein |
Protein accession | YP_750139 |
Protein GI | 114562626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000835814 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTAA TTTTGGTATT AATTCTTATT GGTGCATTAT TATTGCTGAT TATCGGCTTT AGTATTGTCC AACAACAAAA AGAGCGAGCA GAAGCTGAAC GTCGAGTAGA AGCATCTCGC CAGCGCGCCA TCATAGATGA AACTGATGCC GTATTATCCA ACACTGGCAT GACCCCATCT TCTAGCCACA TTATGTTAGT ACTATATCGA CGCATTCAAG ATGCTTTAGA ACAATCTGTT GTCCATGCAT CAGGCCAATT AAAATCGGAT TATGAGCGTC GCCTAGGTGA CATTAAAATG CAAATAGCCA CAGTGTCTAA TTCACCAAGC CAAGTCCCTG CGATTGAGAA CTTTCGTTTA CCTGATAATG ATAGGCAAGT TTTAGAATTA GTAAAAACAC TTAAGAAGCT CAAAGCCATT TTACGTGCTG AACATAATAA GGGAAAAGTG GATCCGTCTA TTTTTGCACA AGAAGAAATG CGTATCGACA ATCTGCAATT AAGAATTAAT GTTGATTCTA TGATTAGCCG AGCTCGTGCA GCTTGCTTTA TGAAGCAGTA CGGTTCTAGT AAACAAATGG TCACAAAAGC ATTAAACACG CTCCACACGA TTAAAGCGCA GACGCCCAAT GATCCTTTTA TTGCTCGTAA AGTCGATGAA GCTAAGCAGT TACTCGATGA AATCATGGGT GCTCAAAAAC ACAGTGAACC GAGTGCACCA AAACCGAAAA AAGAAGGTGA TGATCTTGAT ATGTTGTTTC AGCCAAAAAA GAAATGGTAA
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Protein sequence | MSLILVLILI GALLLLIIGF SIVQQQKERA EAERRVEASR QRAIIDETDA VLSNTGMTPS SSHIMLVLYR RIQDALEQSV VHASGQLKSD YERRLGDIKM QIATVSNSPS QVPAIENFRL PDNDRQVLEL VKTLKKLKAI LRAEHNKGKV DPSIFAQEEM RIDNLQLRIN VDSMISRARA ACFMKQYGSS KQMVTKALNT LHTIKAQTPN DPFIARKVDE AKQLLDEIMG AQKHSEPSAP KPKKEGDDLD MLFQPKKKW
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