| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1433 |
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| Symbol | |
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| ID | 4277250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1707418 |
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| End bp | 1708155 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134207 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_750123 |
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| Protein GI | 114562610 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCCAA TTAATCCTAT TCAGTTAAAA CAGCTTATTG AAGCCAGTTT GTTTGTCTTA
GCTAAGCCGT TGTCGGTAAA AGCCATTAAA GAAACGGTGT TAGCTGACTT TAGTGTATCG
CGTACGCGCA TTCAGGAAAC GCTTGATGAA TTACAGCAAG ATTATCAAGA GCGAGGCGTA
CAGCTAGTTA AAATCGCTAG TGGCTATCGT TTTCAAACTC AAGAAATACT CAGCCCTTAT
TTACAACCTC TTTGGCAAGA AAAATCCCCT AAGTACTCTC GTGCAACGCT TGAAACGTTG
GCGGTGATTG CATATCGACA ACCGGTAACG CGTGGTGATA TTGAATATAT TAGAGGCGTG
GCGATTAGCA GTCATATTAT AAAAAGTTTA GCGGATCGGC AGTGGATTAA AGTGGTTGGC
CATAAGGAAG TGCCCGGAAA ACCAGCATTA TATGCGACCA CCCCTGCATT TCTGGATTAT
TTTAATTTAA CAAAACTTGC CGATTTACCT GCATTAACGG ATGCCGCATC ACTACAAGGG
TTATTTGATA AAGTGCAAGT TGCTCTCGAT GAATCTAACG ATGATGACAG TAGTGATGAT
CACCAAGACG ATGATCAACA AGTCAATGAC GAGCAAAACG ATAGCGAAAA CGGCAGTGAT
ACAACGACAA ATGAACTTGA TGATGTAGAC GACGAAGCCG TCGATGTTGT TGAAAAAAGC
CAAAATCTAA CCCATTAA
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| Protein sequence | MKPINPIQLK QLIEASLFVL AKPLSVKAIK ETVLADFSVS RTRIQETLDE LQQDYQERGV
QLVKIASGYR FQTQEILSPY LQPLWQEKSP KYSRATLETL AVIAYRQPVT RGDIEYIRGV
AISSHIIKSL ADRQWIKVVG HKEVPGKPAL YATTPAFLDY FNLTKLADLP ALTDAASLQG
LFDKVQVALD ESNDDDSSDD HQDDDQQVND EQNDSENGSD TTTNELDDVD DEAVDVVEKS
QNLTH
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