| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1404 |
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| Symbol | |
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| ID | 4277097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1676179 |
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| End bp | 1677114 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134178 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750094 |
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| Protein GI | 114562581 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.416275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTAG AAGACCTTTA TGTGGTACTT AAAGTCGCAG AGTTTCGCAG CATTACTGCC
GCGGCAACCA ATTTAGACAT GCGTACAGCC ACCGCCAGTG CAGCATTAAA AAGGGTTGAA
GCCAGTTTAG GCGTAGAGTT ATTTATTCGC ACCACCCGGC AACTTCGTTT ATCAAGCGCA
GGCGAAAAGT ACATTCCACA GTGTGAACAA GCGATGTTAA TGCTAGAGCA AGCCAAGCAG
AACATGAAAG GTGAGCTAGA CATTGTTGAC GGCGATTTAC GTTTAGCCAT GTCGTCAGAC
CTTGGGCGTA ATATTGTCAT TCCATGGATT GATGACTTTA TGGATACTTA TCCAAAGGTC
AGTATTCGCG CCAATATCAA TGACAGTAAT CTCGATTTTT ACCGCGACTC CGTCGATTTA
GCCTTGCGCT ATGGTTCGCC AAATGACGCT AATCTTTACG GGTTTAAAAT CTGTAATGTC
CCCAGATTAT TGTGTGCATC TAAAGCTTAC CTAGCAAAAC ATGGTATGCC AAAACACCCA
CAAGACCTCG CCTCACATAA CGGACTGTTA TATCAACTCA ATGACATTAC TTACGATGTA
TGGGAGTTTT ATCGCGGCGA TGAGTTATTA AAAATCAAAA TGAAAGGCAA CCGAATCTCA
AATGACGGTG AATTAGTGCA TCGCTGGTGT GTATCAGGCA AAGGCATTGG GCTTAAATCT
TGCCTTGATA TATCAAGTGA CTTACTTAAC GGTAACGTCG TGCATGTATT ACCAGAATAC
CAAACAAAGC CAACAGAACT GTGGCTCATA TTTCCCAGCA GGCAATCGAT TACCCCCGCA
GCCCGATTAC TACGTGACAC CTTAAAAGAT AAAACCCGCA ATATATTGTT GCAGCTAATC
GATAAAGGGA TCTTAGATAA AAGCGTGTTA GATTGA
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| Protein sequence | MLLEDLYVVL KVAEFRSITA AATNLDMRTA TASAALKRVE ASLGVELFIR TTRQLRLSSA
GEKYIPQCEQ AMLMLEQAKQ NMKGELDIVD GDLRLAMSSD LGRNIVIPWI DDFMDTYPKV
SIRANINDSN LDFYRDSVDL ALRYGSPNDA NLYGFKICNV PRLLCASKAY LAKHGMPKHP
QDLASHNGLL YQLNDITYDV WEFYRGDELL KIKMKGNRIS NDGELVHRWC VSGKGIGLKS
CLDISSDLLN GNVVHVLPEY QTKPTELWLI FPSRQSITPA ARLLRDTLKD KTRNILLQLI
DKGILDKSVL D
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