| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1392 |
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| Symbol | |
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| ID | 4277015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1659372 |
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| End bp | 1660508 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134166 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_750082 |
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| Protein GI | 114562569 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.220704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA TTGCCGATGA AAACATGCCT TATGTTGATG CCTTGTTTGG CTATTTAGGC
AAGATTGAAT ATGTGAATGG CCGAACCTTG ACGCCTAAAC AAGTTGAAGA TGCCGACGTG
TTATTGGTGC GTTCGGTGAC GAAAGTGAAT GCAGAGTTAA TTAAAGATGC GCATAAACTG
AAATTTGTGG GTAGTGCGAC GATTGGTACT GATCATGTTG ATGTTGATTA TCTTTCGTTA
CGTAATATTT ATTTTACTAA TGCGCCAGGA TGTAATGCGA CGGCCGTGGG TGAGTACGCA
TTTATTGCCA TGCTGGAGTT AGCGCAACGT TTCGGAGAGT CTTTAGCCGG TAAAGTTGTG
GGGATTGTCG GGGCTGGTAA TACCGGCACT GCAGCCGCGA AGTGTATGCA AGCTTATGGG
CTAAAAGTAT TGTTGTGCGA CCCAATTAAA GCATTGCAAG GTGATACTCG TGAGTTTGTG
TCACTAGACA CTATTATTGA GCAAGCCGAT ATAATCAGTC TGCATGTGCC TATCACCAAA
GACGGTGAGC ATAAAACCTG GTACTTATTT GATGAAGCCC GACTGAATAA GTTAAAACCC
AATACCTGGT TACTAAATTG CTGTCGAGGA GAGGTGATTG ATAACCGAGC GTTGATCAAA
TTTAAACAGC AGCGCGATGA CGTAAAGCTG GTACTTGATG TGTGGGAAGG TGAGCCTAAC
CCAATGGCCG AATTAGTCGC CTTGGCAGAG TTTGCTACGC CGCATATTGC TGGTTATAGC
CTTGAAGGCA AAGCCCGCGG AACGTTTATG TTGTATCAAA AATGGTGTGA ATTACTCGAT
TTTCCGGTAA AAAAATCATT AGAGAGTTTA TTACCGACAT TTCAATTTAA TCAAATTGTC
AGTCAAGGTG ATTTAACCGA AAGCCAATTG CTGAAATTGT CGCGTTTAGT TTATGATTTA
CGTGACGACG ACGTTAACTT TAGAGGGTGT TTCTCAACAG CTACAGGTTT TGATTTAATG
CGTAAAAAGC ACACTTATCG TCGTGAATAT AGTGCAATCT CGTTAACCCA ATCTGTGGAC
TATTTATCTG ATGGTAAGAT AGACCCATCG ATGTTGAGTG CTTTAGGCTT TAATTAA
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| Protein sequence | MKIIADENMP YVDALFGYLG KIEYVNGRTL TPKQVEDADV LLVRSVTKVN AELIKDAHKL
KFVGSATIGT DHVDVDYLSL RNIYFTNAPG CNATAVGEYA FIAMLELAQR FGESLAGKVV
GIVGAGNTGT AAAKCMQAYG LKVLLCDPIK ALQGDTREFV SLDTIIEQAD IISLHVPITK
DGEHKTWYLF DEARLNKLKP NTWLLNCCRG EVIDNRALIK FKQQRDDVKL VLDVWEGEPN
PMAELVALAE FATPHIAGYS LEGKARGTFM LYQKWCELLD FPVKKSLESL LPTFQFNQIV
SQGDLTESQL LKLSRLVYDL RDDDVNFRGC FSTATGFDLM RKKHTYRREY SAISLTQSVD
YLSDGKIDPS MLSALGFN
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