Gene Sfri_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1306 
Symbol 
ID4277368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1552976 
End bp1553446 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content43% 
IMG OID638134081 
ProductDTW domain-containing protein 
Protein accessionYP_749997 
Protein GI114562484 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA TTATTTTACT AACGCATTCG CGAGAAATGG ATCGTGCTAA TAATACCGGC 
CAATTAGTCA AACAGGTTTT AGGCGATAAC GCGCGAGTGG TTGAGTGGCA CCGCAAACAG
CCCGATGCTG AATTATTGGC TGCGATTGAA GCGGGTAAAG TAGGCTTAGT GTTTCCAAGT
GATGAAATTA CGCAAGAGGC TGGCTTGTCA TTAGCGTCGC CTGAATATTT AGTAATTATC
GATGCCACTT GGCAAGAAGC GCGCAAAATG TTTAATCAGA GCCCTTATCT AAAGGAATTG
CCTAAAGTGT CTTTAGTGAA TCCACCTAAG TCGATATACC CACTAAGGCG CAATCAAATT
GAAGGTGGTT TATGCACAGC AGAATGTGTG GCATTACTGC TTAACCATGC GGGTGAAAGC
GCATTATCGA CAAGGTTAAC CGAACAACTA ATGGCATTTG TTGAGCGTTA A
 
Protein sequence
MLKIILLTHS REMDRANNTG QLVKQVLGDN ARVVEWHRKQ PDAELLAAIE AGKVGLVFPS 
DEITQEAGLS LASPEYLVII DATWQEARKM FNQSPYLKEL PKVSLVNPPK SIYPLRRNQI
EGGLCTAECV ALLLNHAGES ALSTRLTEQL MAFVER