| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1303 |
|---|
| Symbol | |
|---|
| ID | 4278501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1548830 |
|---|
| End bp | 1550950 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638134078 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_749994 |
|---|
| Protein GI | 114562481 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCAA ATGATGCTCA AATTACTGAT CATGGTGAAC GTGCATTGCC TGACGAATCG
CCACTGTTAA TGAATCGTCA TGAGGTTTCT GAACCGGGTC ATAGATTAAC TCCGAATCAA
CAAACTGTGT GGTTTACGCT GCGCACATTT GTTGCACAGT TATTTGTGTT TATGGTTACA
GCAAGCTTAT CGACTTATGG CATAAGAGAA ATGTATTTGG TGCTTAACAC CAATGCCATT
ACCAGTTTGC AAATGGTTTT TTTGGTGTTG TTTAGCATTA ACTTTCTGTG GGTTACTTTT
GCTTTTTCAC AGGCACTATT GGGTTTTCTG TTGCATCTCA AACCGCGCCT GATTAAAGAG
AATGAGACAG AACCCGATTT CAAAACGGCG GTATTGCTAC CGATTTACAA TGAAGATCCG
CTGCGTATTC GGGCCACAAT AGAGGCGATG AGTGCAGATT TAATCGCTAC CGCACCGGGT
AAATATGCTT TCTTTATTCT CAGTGACACT AATCGAGCAG ATGCATGGAT TGCTGAGGAA
CAGACTTTTC TGGATCTTAT CAATAACAGC CAACCACAGT GTCCGGTTTA TTACCGTCGT
CGTCACCAAA ACAGTGAACG TAAAGCCGGT AATATCGGCG ACTGGGTTCA GCGCTGGGGC
GGTGATTATG AGGCAATGAT AGTGCTTGAT GCTGACAGCA TCATGAGCGC AAAGTCGATG
GTGACATTAT CACGTCGTTT AGCTGGCGCA CCTGGCGTCG GTCTTATTCA AACCTTACCG
ACACTGGTGT TTGCCAATAC GCTTTATAGC CGTTTACAAC AGTTTGCCAA TCAATGCTTT
GGTCCTATTT ATGCCGAGGG TTTGTCGGCT TGGCATGGTT TGTCATCAAA CTTTTGGGGC
CACAATGCCA TTATTCGCAC CAAAGCATTT GCTGAGTCCT GTCATCTGCC TATTCTGTCC
GGTAAAGCAC CTTTTGGCGG CCATGTATTA AGTCATGACT TTATCGAAGC GGCGTTGCTG
CGTCGTGCAG GTTGGGGTGT ACGTTTTGAT ACCGATATTG AGGCTTCATT TGAAGAAGCT
CCACCGTCGT TAATTGATGT GATGATCCGT GATCGACGCT GGTGTCAGGG TAATTTACAG
CATTCAGCAT TTATGTTTGC TCGCGGTTTT TCATTGCCGA CGCGATTGCA TCTTTTGTCT
GGGGTGATGT CTTACCTGAG CGCCATTTTT TGGTTAGCGC TAATTATGGT CGGGCTTGCG
ATTGCGGTTC AGGCGGCATT TATACGTCCG GAGTATTTTG CTAATCCATC GCTGTTTCCA
ACCTGGCCAG TGTTTGATTC TGAGCGCGCG TTAAGTCTGT TTGTGGTGTC AATGGCCATT
GTGCTGGCAC CTAAAGCATT TGGCTGGTTT GCTGCCTTGA TTAATATTCC GCGGTGTTTA
CAATTTGGCG GGCCAATACT GTTAACTCTG AGTACCTTGT TGGAAATGGT CATGTCTGCT
CTGTATGCAC CTATTCTGAT GGTGTCGCAG TTTGGCGTGG TGTTGTCTAT ATTTCGAGGC
AAAGACAGTG GCTGGATGCC ACAATCTCGA GACGATGGTG CATTGAGCTG GATGTCAGTA
ATGCGTGCTC ATCTTGGTCA TACCGTGTTT GGGGTTGCGC TTGCTTTGAC CGCACTATCG
CTCAGTACAG AACTCTTTTA CTGGTTATTA CCGATTACGA TAGGGTTGAT GCTATCGATC
CCTTTGTCGT GGTTAAGCGG CGGCGCGAGA CGAACTAAAT GGATTAAAAC AGTCGGATTA
CTGCGAGCGC CTGAAGAAAA AAAACCAGTT AACATTTTGG TTAAAGTGAA GGAAAACGAG
GCTAATTTGC CCCATCTTCG ACACATACAT CCGTTCAGTC GGTTGGTTAA TAATCCTTTA
TTACTTAAAT GGCACCTTGC TCAGTTACCA GACGTAGGTG AACAAAAACC GACGTTTTAT
GCCCCTAGAA TTATTGCGGA ATGGAAATTA AATCATGCTG AAAGCTTACC GCAATTAGAA
TCATGGTTGG AACCCGCAGA GGTGATAGCA TTATTAAGCA ATGCGGATTA TCTACAGAAA
TTGAAAATAA TCGGTAACTA A
|
|---|
| Protein sequence | MIANDAQITD HGERALPDES PLLMNRHEVS EPGHRLTPNQ QTVWFTLRTF VAQLFVFMVT
ASLSTYGIRE MYLVLNTNAI TSLQMVFLVL FSINFLWVTF AFSQALLGFL LHLKPRLIKE
NETEPDFKTA VLLPIYNEDP LRIRATIEAM SADLIATAPG KYAFFILSDT NRADAWIAEE
QTFLDLINNS QPQCPVYYRR RHQNSERKAG NIGDWVQRWG GDYEAMIVLD ADSIMSAKSM
VTLSRRLAGA PGVGLIQTLP TLVFANTLYS RLQQFANQCF GPIYAEGLSA WHGLSSNFWG
HNAIIRTKAF AESCHLPILS GKAPFGGHVL SHDFIEAALL RRAGWGVRFD TDIEASFEEA
PPSLIDVMIR DRRWCQGNLQ HSAFMFARGF SLPTRLHLLS GVMSYLSAIF WLALIMVGLA
IAVQAAFIRP EYFANPSLFP TWPVFDSERA LSLFVVSMAI VLAPKAFGWF AALINIPRCL
QFGGPILLTL STLLEMVMSA LYAPILMVSQ FGVVLSIFRG KDSGWMPQSR DDGALSWMSV
MRAHLGHTVF GVALALTALS LSTELFYWLL PITIGLMLSI PLSWLSGGAR RTKWIKTVGL
LRAPEEKKPV NILVKVKENE ANLPHLRHIH PFSRLVNNPL LLKWHLAQLP DVGEQKPTFY
APRIIAEWKL NHAESLPQLE SWLEPAEVIA LLSNADYLQK LKIIGN
|
|---|
| |