| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1282 |
|---|
| Symbol | |
|---|
| ID | 4278393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1516385 |
|---|
| End bp | 1517155 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638134057 |
|---|
| Product | UDP-N-acetylglucosamine acyltransferase |
|---|
| Protein accession | YP_749973 |
|---|
| Protein GI | 114562460 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00362788 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAGATA AATTAGCGTT TGTTCACCCA ACAGCCAAAA TTGGTAATAA CGTCACTATT
GGTCCTTGGA CCTACATTGG TGAAAACGTT GAAATCGGCG ATGACACATG GATAAGTTCT
CATGTTGTGG TTAAAGGTCC AACGGTTATC GGTAAAGGTA ATCGTATTTT TCAATTCTCT
TCAGTTGGTG AAGAGTGTCA AGATAAAAAG TACGCAGGCG AACAAACTCG CTTAATTATC
GGCGACAATA ACATCATTCG TGAGTCGGTT ACCATTCACC GAGGTACGAC TCAAGATAAA
GGTGAAACTC GCATCGGTTC TAACTGTCTG TTTATGGCGT ATGTTCATAT TGCCCACGAC
TGTTTTGTCG GTAATAACGT TATCATGGCT AATAATGCTT CAATTGCCGG TCATGTACAT
GTTGGTGATT GGGTTATTTT GGGCGGCATG ACTGGTGTGC ATCAGTTTGT ACACATTGGC
GCGCATGCCT TTACCGCAGG TGCTTCACTT ATTTTGCAAG ATGTTCCCCC ATTTGTAATG
GCTGCTGGTT CTCCTGCAGT ACCACGTGGA TTAAACTTAG AAGGCTTAAA ACGCCGTGGT
TTTACCAAAG AAAACCAGCG AGCAATTTTG AGTGCGTATA AAGCGGTTTT CCGTAAGAGT
TTAACCATTG AAGAAGCTAA CGCTGAATTA ATTGAGGCCG CTGAAAAAGA CATCAATGTG
AAAGCATTTA TGGAATTTAT CAACCACTCT GCTCGTGGCA TTATTCGATA G
|
|---|
| Protein sequence | MIDKLAFVHP TAKIGNNVTI GPWTYIGENV EIGDDTWISS HVVVKGPTVI GKGNRIFQFS
SVGEECQDKK YAGEQTRLII GDNNIIRESV TIHRGTTQDK GETRIGSNCL FMAYVHIAHD
CFVGNNVIMA NNASIAGHVH VGDWVILGGM TGVHQFVHIG AHAFTAGASL ILQDVPPFVM
AAGSPAVPRG LNLEGLKRRG FTKENQRAIL SAYKAVFRKS LTIEEANAEL IEAAEKDINV
KAFMEFINHS ARGIIR
|
|---|
| |