| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1192 |
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| Symbol | fliP |
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| ID | 4277061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1402201 |
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| End bp | 1402962 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133967 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_749883 |
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| Protein GI | 114562370 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGT ACACAACAGT ATTGGCATTG GCGATGATGG CGCTAGTGGC ACTAATTTTG
TCGCCCACAG CACTGGCTCA AGACGGTGTG CTACCAGCGT TAACGGTTAC AACCGCTGCA
GACGGAACAA CTGAATATTC GGTAACCATG CAGATTTTAT TGCTGATGAC AGCAATGAGT
TTTATTCCTG CAATGGTGAT AATGCTCACT TCATTTACCC GCATTATTGT TGTGCTATCG
ATATTAAGAC AAGCTTTAGG TTTACAACAA ACACCTTCTA ATCAGGTATT GATAGGCATC
AGTTTGTTCA TGACTTTTTT TATTATGGCG CCGGTTTTTG ACAAGATTTA TGCTGAAGCT
GTAGAGCCTT ATATCAATGA AACCATGACG TTAACGCAAG CTTATGATGT TGGAAAAGAA
CCGATTAAAA CATTTATGCT ATCGCAAGTG CGTACCACTG ACTTACAAAC ATTTATTGAA
ATCTCTGGCT ATAAGGATAT TCAATCTCCT GAGCAAGCAC CAATGAGCGT GGTGATCCCA
GCGTTTATTA CCAGTGAACT TAAAACGGCG TTCCAAATCG GCTTTATGCT GTTTGTGCCT
TTTTTAGTAC TCGATTTGGT CGTCGCCAGT ATTCTAATGG CCATGGGTAT GATGATGTTG
TCACCGATGA TTGTGTCATT GCCATTTAAA ATTATGTTGT TTGTACTCGT CGATGGTTGG
GGCTTAGTGA TGGGTACATT AGCGAATAGT TTCGGAATAT AA
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| Protein sequence | MNKYTTVLAL AMMALVALIL SPTALAQDGV LPALTVTTAA DGTTEYSVTM QILLLMTAMS
FIPAMVIMLT SFTRIIVVLS ILRQALGLQQ TPSNQVLIGI SLFMTFFIMA PVFDKIYAEA
VEPYINETMT LTQAYDVGKE PIKTFMLSQV RTTDLQTFIE ISGYKDIQSP EQAPMSVVIP
AFITSELKTA FQIGFMLFVP FLVLDLVVAS ILMAMGMMML SPMIVSLPFK IMLFVLVDGW
GLVMGTLANS FGI
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