Gene Sfri_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1152 
Symbol 
ID4277861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1361119 
End bp1361829 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content44% 
IMG OID638133926 
Producthypothetical protein 
Protein accessionYP_749843 
Protein GI114562330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAACA GGCTTTTTAT CTCCACGGTC ATGCTTGCGT CGTTATCGTT AGCGGCATGC 
ACCCAAACGC CTAATGCTGC CAATAACCTT GCCTTTAGTA ATAACGGTAA ATTTGTCAAA 
ATCGTCGACG AAGATGAGGT TTATCACGAT AAGCTGGCTT ATGATATTCA GGCTGCGGGA 
ATATCACCCA AAGGCCAAGT GAATGTGTGG GCAGAAAAGT TAGTTAACGA GTTAGTGTTA 
CAAAACGACG CCTTACGCCC AGATCAACCA CTGCTGATTT CTACGCCAGT GATGACCAGT 
AATTTCAATA CGACCAATGA ATTAGCATTG CAGTTACAAC AAGGGTTACT CGCGGCGTTC 
CACGCTCATG AATTTAATTT AGTCGATTTA AATGTGGCGA CAAATTTGCG CGCCACAGAA 
CAAGGCGAGT TTATGTTGAG CCGCAACTGG GAACTGTTAC GTGCAGATTT GCCGGTATCG 
CATGTATTAG TGTCAACCAT GACCCTAACC CCTGAAGGTA TTGTGTTTAA CGGCCGAGTG 
GTTAATGTGA CTAATAATCG CGTCCTTTCA GCGGTGCAAT CATTTGTAGC AGCATCGAGC 
TTATCGGGTT ATTTACAGCC CTCTGAAATG ATTGAATCAC GCAATGGTTT ACTGTATCGC 
CACGAAAATA AGGGCGACAG TCGTTACACC GTATTAGGAG ATAAGCTATG A
 
Protein sequence
MINRLFISTV MLASLSLAAC TQTPNAANNL AFSNNGKFVK IVDEDEVYHD KLAYDIQAAG 
ISPKGQVNVW AEKLVNELVL QNDALRPDQP LLISTPVMTS NFNTTNELAL QLQQGLLAAF 
HAHEFNLVDL NVATNLRATE QGEFMLSRNW ELLRADLPVS HVLVSTMTLT PEGIVFNGRV 
VNVTNNRVLS AVQSFVAASS LSGYLQPSEM IESRNGLLYR HENKGDSRYT VLGDKL