Gene Sfri_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1118 
Symbol 
ID4277039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1319311 
End bp1319931 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content43% 
IMG OID638133892 
Producthypothetical protein 
Protein accessionYP_749809 
Protein GI114562296 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.587767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATTT ATAGCACAGA AGAACAACAA GTAGATGCTA TCAAGCAGTT CTGGAAAGAT 
TATGGTACCT CGATTGTCGT TGGTGCCGTA GTAGGCCTTG GTGGTCTATA TGGTTGGAAT 
ACTTATTCTG ACATGAAAGT GACTGCGGCT GAAGAAGCTT CAGAGTCATT CCAGTCCATC 
GTGACACAGT CGGCTAATCC TGCTGCGTTA TTGGTTCAGG CTGAAAACTT TACATCAGAA 
CATGATCAGC AAGGTTATCA AGCGCTACTA GAATTAATGG TTGCAAAATC AGCTGTTGAA 
GCGGGTGATT TAGCCAAAGC AGAAGCATCA TTTACTAAAG TGATTGCTGC GCAACCTGGT 
TCTGGTTTAG GCATGGTAGC GATGATCCGT TTAGCGCGTA TCCAAGCTGA GCAAAACAAT 
TTAGGGATGG CGTTAGCGAC GTTAGAACAA GTGACTGATA AAGCATTTGC TTCACAACGT 
GAAGAATTAA AAGGCGACTT TTTAGTGCGT CAAGGTGATT TGGATAAAGC CAAATCAGCT 
TATCAAGCAG CAGTGGATAA TGGTGGTGCG TTAGCCAGTC CAGCGTTGAC CATGAAATTA 
GACAATCTAA ACAAGGCATA A
 
Protein sequence
MEIYSTEEQQ VDAIKQFWKD YGTSIVVGAV VGLGGLYGWN TYSDMKVTAA EEASESFQSI 
VTQSANPAAL LVQAENFTSE HDQQGYQALL ELMVAKSAVE AGDLAKAEAS FTKVIAAQPG 
SGLGMVAMIR LARIQAEQNN LGMALATLEQ VTDKAFASQR EELKGDFLVR QGDLDKAKSA 
YQAAVDNGGA LASPALTMKL DNLNKA