| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1025 |
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| Symbol | |
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| ID | 4277140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1203488 |
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| End bp | 1203919 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133793 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_749716 |
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| Protein GI | 114562203 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCACA CCTCTGTGGA GCACCAATAC AGCCCAGTTC ACTCTTTTTC AGTGCAAATT
TATTATGAAG ACACTGACTT TTCTGGTGTG GTATATCATC CTAATTTCTT AAAGTATTTC
GAACGTGCGC GTGAACATGT CATCGGCGCA GGTGTACTCA GCCAACTTTG GCAGCAACAA
CAATTGGGTT TTGCCGTTTA TCGCAGCGAT ATGTTATGTC ACGATGGGGT TGAGTTTGCA
GATATTATTG ATGTACGTAC TCAATTTTAT TTTGAAAGTA AATATCGTAC CGTATGGAAA
CAACAAATAT GGCGTCCGAA TGCTAAAAAA CCTGCAGTAA CAGCTACAAT TGAAATGGTC
TGCATGAACC AGAAGCGTCA ACTTGCACCT ATGCCTGTAG AGTTAATCGC CCATTTATCC
GCAGGATCTT AG
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| Protein sequence | MSHTSVEHQY SPVHSFSVQI YYEDTDFSGV VYHPNFLKYF ERAREHVIGA GVLSQLWQQQ
QLGFAVYRSD MLCHDGVEFA DIIDVRTQFY FESKYRTVWK QQIWRPNAKK PAVTATIEMV
CMNQKRQLAP MPVELIAHLS AGS
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