| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1009 |
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| Symbol | |
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| ID | 4277124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1180179 |
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| End bp | 1182563 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133777 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_749700 |
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| Protein GI | 114562187 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAG ATAACCACAG GGCATTAATA GAACAACTGA AACCGTTGAT CATGGAACCT
GATTTTCAGG ACGTATTTGA ACAGTTAACA GTTGATGAAT CGAATTCAAC CCGTTTTCTA
TTGAAAATGG AGCTAAATCG CATCTCATCT TTGTGCACGC GAATTATCGA TTTACGAGAT
AAAACAGAAC TGCCATGTGA AGAAGTTGTC GTCGCCAATC AAAGATATTT CCTAGACGAG
CCCGCTAAAG AAGCCTTGCT ACAAGCGCTA CCATTATACC GTAACAAATA TACCTTAGGT
GTGTACGAGC ACGTTATAAA AGCGCATAAA CTTCGACGTC TTAAACTCAG AGAGAATGTT
TCAGTTGAGG TCATTGACGA AGAAAATCCC TTTTTGGTGC CTGGTGTTGT GCTTGGCAGT
TATTTTAATC GCTGTGAAGA ACGAATGAAT TATAGCATTC GAATTATGGT TTCTCAGCAA
GGAATAACCG AAGTCAGTGG TGCAACGCTA GATTTATCTG TCGGCGGAGC TCGCATTAAG
CTGCCGTTAA AGCATCATTT AGACCAAGAC AAACCTTTAC TGGTAAAACT ACTCGAACTC
AGTGATGAAT TTTATCTCGA TGATCTAAAA CATGGTGTTG AATATCAAAT AGTGGATATT
CAAAACAAAG ATGATAGTGC TGTTTTTAGA TTGAAAAGAC TGGGTGGCGG AGAAGCATTA
GACAGCTTGT TATCACAGCT TATCCGCGGC TATAAGTTTC GTTATAAAGT AGATGTCAAC
GACGTCATTG TTACCGCTAC CGGGTTAGGT TATGAGCGAC ATTACTTACC TCTGTTAACA
CATTTACCTC TGTTCGTTTC CATCATTGAA GGTAAACCAC TCATAAACTA CGAATTATTG
GGTAGAGGTA ACAAACCAAT CCAACATTAT TTTCAAGATG AAAATGAAAT TAGTCAGTTA
CCGAGTTTTA TTAATACCAG ACGTTTAACC CAAATGCTCA AAAACATTGA TAATAGTGAG
CATTGTTATT TATTCAGTTT TATTCATAAC TCTAACGGTA AATTACATTT TTATTCTGCA
ACTTTAGCGG AGCTAAAAGC GACCAAAAAT ATTCATCTTT TTTTGGGTTT TGCGTCTACC
AAAACAAGTT GGCGCGTATT TAAAATTGTA ATGCAACCTA TTGATCATAG CAAAAACTAC
AAAACGTCCA CTTTACCGGG GGATGATGCA CGTTATGCTG CCCTCACTGA GCAACAATTA
GCTCAATTTA GTCATACTTT ACAACTTATT GATTTAACCA ACGAGGAAGC TCGTAAAGAC
TATCAATGCT GGTTTGATCA ATCTGATGTG AATGGCTTAA AGATATTCTC CCAAGCAAAA
ATAAAACAAC ACAGCATCAA AAAAGTATCA ATGCCATTTA GTGAGCGGCG CCATGAGGCT
CGATTCATTT TTAAAACCTT AATCACAATT CAACAAGGTG ACAAACAGGC CACTGGTATT
ACCCATGATA TTTCGAGTCG AGGTTTACAA CTGACGTTAG AGAAATCGGC TAACTTCAAC
GAACCTGGAG CAGTCACATT ATCATTTCCA CGCCTGCAAG CCGCTGCGGG TAAAACTAAT
TTATCAAATT TACCTTATCA GTTAATTCGC AGCAGGATGA ATGGTGTGAC TTTACATTTG
AGCGCCATCA TAGGTCACTC CCCGCATGAA GGTGTAGAGT TTTTAAGTAA ATTGATTGCT
CACAATAAAC AAAAACTCGA GCAGTTATCA GATAATGAAG GCCAGAAAAA AGAACTGGCT
GATGGCATGA AAAACCTTGT AATGCGCCAA TTACCAGGAG TGCCATATTT TATTGAAAAA
ACAGTAAAAG CGGCTCAAAT GGCTTACATA GGTATTGGCA CAACCACAGA TGAAATAAGC
CATTTATTTG CTCAAGACAG CGATAAAGTA CTGCAATACA ATTTAAAACC ACTATTGGAC
AACAATGTAT TAAAACAACA CATCATAGAT CCTATCAAGT TAATGAAACC GACTCATGGT
ATGGCCTTTT TTGAAGTGTT TATGCAACTC ACCCGTCACC CTAGAGGTGC AGTACAGATC
CAATGTAAAC TTAAATCTGA ACTGGGTAAT AGAGAACAAC AAATTCAATT TATTACTCAA
AGTAAAAAAG TGGGTCGCTT CATGGCGTTA AGGGTGTATA TAGGAGCAAC TGACAAGCCC
GATATGAGCT ATATTCGACG CGAGCTAGAA TATATCCACA TACATGCTAA TCACCGTGCA
AAGCAATTAG AAGAGCAATT GTGGAGAGTT ATCGGTTCAG GTGAGCTATT AGATATTACT
ACTGAAGTTG AAATCCGTTT TCCAAGCTTA ATGACACTAG CCTAA
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| Protein sequence | MSLDNHRALI EQLKPLIMEP DFQDVFEQLT VDESNSTRFL LKMELNRISS LCTRIIDLRD
KTELPCEEVV VANQRYFLDE PAKEALLQAL PLYRNKYTLG VYEHVIKAHK LRRLKLRENV
SVEVIDEENP FLVPGVVLGS YFNRCEERMN YSIRIMVSQQ GITEVSGATL DLSVGGARIK
LPLKHHLDQD KPLLVKLLEL SDEFYLDDLK HGVEYQIVDI QNKDDSAVFR LKRLGGGEAL
DSLLSQLIRG YKFRYKVDVN DVIVTATGLG YERHYLPLLT HLPLFVSIIE GKPLINYELL
GRGNKPIQHY FQDENEISQL PSFINTRRLT QMLKNIDNSE HCYLFSFIHN SNGKLHFYSA
TLAELKATKN IHLFLGFAST KTSWRVFKIV MQPIDHSKNY KTSTLPGDDA RYAALTEQQL
AQFSHTLQLI DLTNEEARKD YQCWFDQSDV NGLKIFSQAK IKQHSIKKVS MPFSERRHEA
RFIFKTLITI QQGDKQATGI THDISSRGLQ LTLEKSANFN EPGAVTLSFP RLQAAAGKTN
LSNLPYQLIR SRMNGVTLHL SAIIGHSPHE GVEFLSKLIA HNKQKLEQLS DNEGQKKELA
DGMKNLVMRQ LPGVPYFIEK TVKAAQMAYI GIGTTTDEIS HLFAQDSDKV LQYNLKPLLD
NNVLKQHIID PIKLMKPTHG MAFFEVFMQL TRHPRGAVQI QCKLKSELGN REQQIQFITQ
SKKVGRFMAL RVYIGATDKP DMSYIRRELE YIHIHANHRA KQLEEQLWRV IGSGELLDIT
TEVEIRFPSL MTLA
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