| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0962 |
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| Symbol | |
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| ID | 4277760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1121276 |
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| End bp | 1122739 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133728 |
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| Product | aminoacyl-histidine dipeptidase |
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| Protein accession | YP_749653 |
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| Protein GI | 114562140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.405496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGCAT TAACTCAATT ATATCCTCAG CCTCTATGGC AATGGTTTGA ACAAATTTGC
GCTATTCCAC ATCCATCAAA GCATGAACAT GCGTTATCAC AACATATTCA ACAATGGGCA
AAAGCTCAAG GCCTTGCGGT TGTTGAAGAC AAAGTGGGTA ATTTAATCAT CCGTAAGCCT
GCTACTGCAG GAATGGAAAA CTGCAAAATA GTGGTGTTAC AAGCGCACAT TGATATGGTG
CCGCAAAAAA ATGCCGACAA AGTACATAAT TTTGAAACCG ATCCGATTGA AGCCTATGTT
GACGGTGATT GGGTTAAAGC TAGAGGAACA ACCTTAGGTT CTGATAACGG TATTGGTATG
TCTTCGGCGT TGGCCATTTT AGGCAGTAAA GACATTAAGC ACGGGCCACT CGAAGTACTG
CTCACCATTG ATGAAGAAGC CGGCATGACT GGCGCTTTTG GTTTAGAAGC CGGTTACCTT
GATGCTGAAA TTTTAATTAA TACTGATTCA GAGCAAGAAG GTGAAATCTA CATGGGTTGC
GCCGGCGGTG TTGATGCACA AATAAGTGTA CCAATGTCTT GGCAAGCACC AGAACAAAGC
AACGCCAGCT TTTCACTGAC TATGTCGGGT TTAAAAGGCG GCCATTCTGG TGTCAATATT
CATCTTGGTC GTGGTAACGC TAACAAGTTA TTAGCGCGAT TTTTATTTAA ATACAGTGAC
GAATTAGCCT TAGAGCTAGT CAGCTTTAGT GGTGGTTCGC TGCGTAATGC GATTCCGCGT
GAAGCTAACG TTCAATTGAT GTTGCCAGCT GAAAATGTTG AAGCATTAAA ACAAGCTATT
GAGTCATTTC AAGCGTTAGT GCGTGAAGAG TTAGCCGTAG CTGATCCTGC CATGTTACTC
ACGTTAGCCG CAATTGATGC ACCAACAAAA GTGATGGACG AAGAAGCGCA AAATACCTTA
ATCGACTTAT TACATGCTAG CCCTAACGGT GTTATCCGCA TGAGCGATGA AGTAGAAGGC
GTCACTGAAA CATCATTAAA TATCGGCGTG ATCAGCACTG AAGATGAAAG CGTAGAAATA
TTATGCCTTA TTCGTTCATT AATCGATTCG GGACGTGAAG AAGTCACTGG TATGCTAACC
GCACTATCAA ATCTATCGGG TGGTAGCATT GATTTAAGCG GTGCTTATCC AGGTTGGAAA
CCAGACACTA GCTCACCTGT TATGGAAATT GTGCGTGACA CCTATAACGA TATTTATAAA
AAAGATCCTA CCGTGATGGT TATTCATGCA GGTCTTGAAT GTGGTTTATT TAAAGAACCT
TATCCGCACA TGGATATGGT ATCGATTGGT CCGACGATTC GTTATCCGCA CAGCCCAGAT
GAAATGGTCA ACATCACCAC GGTTGGTCAA TATTGGGAAT TACTGCTTGC TGTATTAGAG
CGTATCCCAG CTAAAGAGGC GTAA
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| Protein sequence | MTALTQLYPQ PLWQWFEQIC AIPHPSKHEH ALSQHIQQWA KAQGLAVVED KVGNLIIRKP
ATAGMENCKI VVLQAHIDMV PQKNADKVHN FETDPIEAYV DGDWVKARGT TLGSDNGIGM
SSALAILGSK DIKHGPLEVL LTIDEEAGMT GAFGLEAGYL DAEILINTDS EQEGEIYMGC
AGGVDAQISV PMSWQAPEQS NASFSLTMSG LKGGHSGVNI HLGRGNANKL LARFLFKYSD
ELALELVSFS GGSLRNAIPR EANVQLMLPA ENVEALKQAI ESFQALVREE LAVADPAMLL
TLAAIDAPTK VMDEEAQNTL IDLLHASPNG VIRMSDEVEG VTETSLNIGV ISTEDESVEI
LCLIRSLIDS GREEVTGMLT ALSNLSGGSI DLSGAYPGWK PDTSSPVMEI VRDTYNDIYK
KDPTVMVIHA GLECGLFKEP YPHMDMVSIG PTIRYPHSPD EMVNITTVGQ YWELLLAVLE
RIPAKEA
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