| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0952 |
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| Symbol | |
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| ID | 4277680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1113401 |
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| End bp | 1114033 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133718 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_749643 |
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| Protein GI | 114562130 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00854203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGACG CTAAAGAACT TAAACAGGTT CTGACCGGAC CGATTATCAA TAACAACCCA
ATTGCATTGC AAATTTTGGG TGTGTGTAGT GCACTTGCTG TTACCAGTAA ATTAGAAACA
GCATTAGTAA TGACGATTGC ATTAACAGCG GTAACAGCGT TTTCTAACCT GTTTATCTCT
CTTATTCGTA ATCACATTCC AAGCAGTGTG CGTATTATTG TACAGATGAC CATTATTGCG
TCTTTAGTAA TTGTGGTTGA CCAAGTATTA CAAGCTTATG CCTATGCCAT TTCTAAGCAG
TTATCGGTAT TCGTAGGTTT GATTATTACT AACTGTATTG TAATGGGTCG TGCTGAAGCT
TACGCAATGA AAACCCCTCC AATGATGAGC TTTATGGACG GTATCGGTAA CGGTTTAGGT
TACGGTGCTA TTCTATTGTC TGTTGGCGTG GTGCGTGAAC TATTTGGTAA TGGTTCATTA
TTCGGCGTAG AAATCCTCAG CAAAATCTCT GACGGTGGTT GGTATCAGCC TAACGGTTTA
TTACTACTGC CACCGAGTGC ATTCTTCTTG ATCGGTGGTT TGATCTGGTT GATCCGTACT
TACAAGCCAG AGCAAGTTGA AGCAAAAGGG TAG
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| Protein sequence | MADAKELKQV LTGPIINNNP IALQILGVCS ALAVTSKLET ALVMTIALTA VTAFSNLFIS
LIRNHIPSSV RIIVQMTIIA SLVIVVDQVL QAYAYAISKQ LSVFVGLIIT NCIVMGRAEA
YAMKTPPMMS FMDGIGNGLG YGAILLSVGV VRELFGNGSL FGVEILSKIS DGGWYQPNGL
LLLPPSAFFL IGGLIWLIRT YKPEQVEAKG
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