Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0919 |
Symbol | |
ID | 4278623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1082298 |
End bp | 1083221 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133685 |
Product | transcriptional regulator, LysR family protein |
Protein accession | YP_749610 |
Protein GI | 114562097 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TTGAAGCCAT GAGACGGTTT GTTCATGTCG CGCAAACCGG TAGCTTTACT CAGGCTGCAG CGGCATTGCA CTTACCTAAA TCGAGTATTT CAACTGCCGT CGAGTCATTA GAGCAACTAT TAGGCACTCG GCTTTTTCAG CGCAGTACCC GGCGGGTGAC GCTAACCCAT GACGGGGCTA TCTATTTGGC TCAATGTCGA CAAATATTGC ACGATATAGA TGCTTTAGAA AGCCAGTTTC AGCATGAAAA TGACAGCGTT AGAGGCGTCA TAAAAGTCGA TATGCCGAGT CGTTTTGCCA ATAAAACCGT ACTGCCTCGA CTAAGCGAAT GGTGTGAGCG TTATCCCCAC GTCAATGTTG TCATCAGCAG TACGGATTAT CATATCGATC CAATAAAGTC TGGGGTTGAT TGCCTGATCA GAGTGGGCAA TCAAGGTAAC AGCTTACTAA TTGCCAGACC CTTAACTCAA TATCGTATTA TCAACTGCAT TAGCCCAACC TATATCCAAC GCTATGGTAC GCCAAGCACC TTAGCAGACT TACAACACCA CCGAATGATC GGTTACGTCC CGACAGTGAA TCATAGTGCC TCCATTGATT ATAATTCGGC CGAGTTTGAC TATGTAGAAC AAGGGCAGAA TTGCCAGCAC ACGGTTCCAA GTGTGATATC GGTGACTAAT TCCGACGCTT ATACCTCGGC ATGTTTAGCT GGGCTGGGTA TTGCTCAAAT TCCACAGATG GGGGTAACAG ACTACTTAAA TACTGGTCGT TTAATCCGGA TTTTGCATCA ATATGAAGCA GCTCCTATGC CAGTGAGTAT CTTGTACCCT TCACGTAGCC AACTACCTAA GCGCCTAAGT TTGTTTATGG ATTGGCTCGA CAGTATTGTT AAAACCGCAG TAATGAATCA ATAA
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Protein sequence | MNKFEAMRRF VHVAQTGSFT QAAAALHLPK SSISTAVESL EQLLGTRLFQ RSTRRVTLTH DGAIYLAQCR QILHDIDALE SQFQHENDSV RGVIKVDMPS RFANKTVLPR LSEWCERYPH VNVVISSTDY HIDPIKSGVD CLIRVGNQGN SLLIARPLTQ YRIINCISPT YIQRYGTPST LADLQHHRMI GYVPTVNHSA SIDYNSAEFD YVEQGQNCQH TVPSVISVTN SDAYTSACLA GLGIAQIPQM GVTDYLNTGR LIRILHQYEA APMPVSILYP SRSQLPKRLS LFMDWLDSIV KTAVMNQ
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