| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0899 |
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| Symbol | |
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| ID | 4276996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1057732 |
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| End bp | 1059045 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133665 |
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| Product | hypothetical protein |
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| Protein accession | YP_749590 |
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| Protein GI | 114562077 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.811824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTTT ACTATTGTGA TTTAGCGTGG CGAAGTATCC GTAAAACACC GATGTTATCG
ATGTTGATGG TATTAGCGAT TTCGATTGGT ATCGGCATTA CTATCACTAC GCTCAATGTC
TATAAAACTA TGTCTTATAA TCCGGCGGGC GATCGCAGTG AGGTGATTAA TTCAGTGCAG
TTGTGGAGCC AAGGCTTGGA TACCTGGGAT GAGTTTATTC CAAGCATCAC CTATATGGAT
GCGATGAACT TACGCAATAA CAAAGAATTA AGTCTCAAAG CAGCGACTTA TCGAACTGGC
TTAGCATTGC AATCTGACAA TCCTAAAATT GAACCCGTGT TGAACAGCGT TCGGTTAACC
GACAGAGACT TTTTTAGGAT TTTTTCGGTA CCCTTTATTT ATGGCAGTTA CTGGGATGCC
AGTGTTGATT TACGCCCAGC TTACCAAGTG GTGATTAGTC AAAAATTAAA TTTACGCTTT
TTTGAAGGTA AAAATAGCGT AGGCAAAACA CTCTTTTTAG ACCGTAAACC TTATCAAATT
GTTGGGGTGA TTGATGACTG GAATCCGCAA CCTAAATACT ACGATCCACT TAATGGTGCC
TTTAATGATG CTGAAGAGAT ATTCATTCCG TTCTCGTTAA CAGGCCAAGA AGAATTTGAT
GTATGGGGTA ACACCAGCGG TTGGAAGTTC GAACCCATGA TCACATACAG CGACCGCTTA
GCGTCAGAAA AAGTATGGAT TCAATTTTGG ACTGAACTGA ACACCGATGA GCAGAAACAA
AGCTTTTTAG GCTGGTTAAC GCGTTATGTT GAGCAGCAAA GAGCGCTCGG CCGCTTTACT
GATACCGCTA AAATCCCTAG CGAGTCAGTG CAAATTAGCG ACATCGCGAA ATGGCTTGAA
GATAACGATG TGGTGCCCAA AGATAACAAA ATACTAGTCG GTTTAAGCTT GCTGTTTTTA
AGCGTGTGCT TGGTGAATAT TCTCGGGCTG TTGCTAACCA AGTTTTTAAA GCGTGCGCCA
GAGGTGGGTG TTCGTCGTGC TATTGGTGCC AGTCGTGGAC AGATTTTTAG TCAGTATATG
GTCGAAGTGG GTATGATTGG TTTTATCGGT GGCGTAGTGG GTTTGTTATG GGCTTGGGGG
TCGTTAACGG CGCTGCATAG CTATTTTTCA ATGGACCAAA GTGTTACTGG GCTTGATGCC
AGTATGTGGA TTATCACGCC ATTAATTGCT ATCTCTACCG CGGTATTGGC TGGGGTTTAC
CCTGCTTGGG TGGTGTGCCG CACTAAACCC AGTGTGTATT TAAAAGCCCA ATAA
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| Protein sequence | MFFYYCDLAW RSIRKTPMLS MLMVLAISIG IGITITTLNV YKTMSYNPAG DRSEVINSVQ
LWSQGLDTWD EFIPSITYMD AMNLRNNKEL SLKAATYRTG LALQSDNPKI EPVLNSVRLT
DRDFFRIFSV PFIYGSYWDA SVDLRPAYQV VISQKLNLRF FEGKNSVGKT LFLDRKPYQI
VGVIDDWNPQ PKYYDPLNGA FNDAEEIFIP FSLTGQEEFD VWGNTSGWKF EPMITYSDRL
ASEKVWIQFW TELNTDEQKQ SFLGWLTRYV EQQRALGRFT DTAKIPSESV QISDIAKWLE
DNDVVPKDNK ILVGLSLLFL SVCLVNILGL LLTKFLKRAP EVGVRRAIGA SRGQIFSQYM
VEVGMIGFIG GVVGLLWAWG SLTALHSYFS MDQSVTGLDA SMWIITPLIA ISTAVLAGVY
PAWVVCRTKP SVYLKAQ
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