Gene Sfri_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0816 
Symbol 
ID4278769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp960263 
End bp961234 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content45% 
IMG OID638133584 
Productaldo/keto reductase 
Protein accessionYP_749509 
Protein GI114561996 
COG category[R] General function prediction only 
COG ID[COG4989] Predicted oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTT TACCCTTAAC AGAATTTTTA CCCAACGTTA GCCCTATCGT TTATGGCTGT 
ATGGGGCTGG GTGGCGGTTG GAATAACAAT GCCATTATTA AAGCGGATAT TCAGCAAGCC
CATGAGGTCA TTGATACTGC GCTGGATAAC CAAATAAACT ATTTTGATCA CGCAGATATT
TATACTTTTG GTAAAGCTGA ATCAGTTTTT GGCAAAGTAT TGGCTCAGCG CCCTGAGTTG
CGTGAAAAAA TGTACCTGCA AACCAAGTGC GGTATTCGAT TTGAAGACAG CAAGGGCCCT
AAGCGTTACG ACTTATCAGC AGAGTGGATT AAGTATTCTG TTGATAACAG CCTTAAGCAA
CTCAATGCCG AATACCTTGA TGTATTAGTG CTTCATCGCC CCGATCCGTT AATGCAGCCA
GCAGAAATTG CCGAAACATT TCAACAGCTA AAAGCTGCTG GTAAGGTGCG TTTTCTGGGT
GTTTCGAATA TGCAGCAACA TCAAATTAGC GCGCTGCAGC GTATGCTTGG AGAGCCATTA
GTGGTAAACC AAATTGAAAT GAGTCTGCAA AAACACGCAT GGGTAGACGA AACCGTTTAT
GCGGGTAATC AAGACGGTAA AGACATTAAC TTTACCCCTG GTACGCTCGA GTACTGCAAT
CAACATAATA TACAAATTCA GGCGTGGGGC AGCTTATGCC AAGGGATTTA CAGTGGCATC
GCAACAACGG AACAGTCTAC AGCCGTGCAG CAAACCAGCC AGCTTGTTGC TACGTTAGCC
GCTGAATATC ACACTAGCCC AGAAGCCGTG TTATTAAGTT GGTTAATGCA GCATCCTAGC
CAAATTCAAC CTGTTATTGG CACTACCAAC CTAGAGCGTA TTAAGGCTTG TGCAAAAGCC
ACTAACGTCT CGTTAAGCCG TGAGCACTGG TATGCATTGT ATGTCAGCGC TAAAGGACAT
GAGTTACCTT AA
 
Protein sequence
MTGLPLTEFL PNVSPIVYGC MGLGGGWNNN AIIKADIQQA HEVIDTALDN QINYFDHADI 
YTFGKAESVF GKVLAQRPEL REKMYLQTKC GIRFEDSKGP KRYDLSAEWI KYSVDNSLKQ
LNAEYLDVLV LHRPDPLMQP AEIAETFQQL KAAGKVRFLG VSNMQQHQIS ALQRMLGEPL
VVNQIEMSLQ KHAWVDETVY AGNQDGKDIN FTPGTLEYCN QHNIQIQAWG SLCQGIYSGI
ATTEQSTAVQ QTSQLVATLA AEYHTSPEAV LLSWLMQHPS QIQPVIGTTN LERIKACAKA
TNVSLSREHW YALYVSAKGH ELP