| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0815 |
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| Symbol | |
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| ID | 4278768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 959231 |
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| End bp | 960130 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133583 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749508 |
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| Protein GI | 114561995 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATAA TGATGAGCCG TGAACACAAA AAATTTGAGC GATTATTCTT ATTCAGCGAA
GTCGCCAAAC AACTTAGCTT TACCGAAGCG GCTGCCTCGT TAGGGATATC GAGAGGATAT
TTATCTGAGC AGATTAGACA ACTCGAAAAA GAAGTAGGCC GGCCATTACT CATACGCACA
ACACGCAGTG TAAGGTTAAC GCCACAAGGT GAGATGATTT TATCGAGCAT GGGACAAGTA
AAAGCCGACT TACTCATGCT AGACAAAAGA ATTCGTCACG ACAACGACGA TATCTCAGGG
CGGATAAGCA TTACAGCGCC TAGCCAACTA ACGCAACGAC ATTTGCTTAA TATTTGCCAT
GAGTTTACTC AATTACATCC TCAGGTACAT TTTAGTATTG ATTGCAGCTA TACCCTGCAC
GACTTAACCC GTAACGATTT TGATCTCGCA TTTAGGGCTA CCGCAACACC ACCGCAAAAC
ATGGTCGCTA AAAAGCTATT TGATTATCAG CAAATCTGTT GTGCGGCCCC AGCTTATCTT
CAACAACACG GCACACCTGA TTCGATTGAG GATTTGCACC ATCACCAATG CTTAACCGCT
ACAGAACAAA CACACTGGAC CTTCAATGCT CAGCCGATAT TAATCAATAG CTGCTTGAGT
GTTAACGATA ATCATATGCT TAAACAGTTG GCATTATTGG GTCGAGGGAT TATTGTCGGG
CCAGAGTATT TAGTCGATAA AGAAATACAA GCAGGCACAT TACAAGCCAT CTTAACCACA
GAAACCATGA ACGCATCGAC CGCCTATTTA ATTCACCCAC AGTTGGTACA GCAATCAGCA
AGGCTAAGCA GTTTTATTCA GTTTACGTTA AATTGGTTTC AGCAATTGAA TGCCCAATAA
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| Protein sequence | MVIMMSREHK KFERLFLFSE VAKQLSFTEA AASLGISRGY LSEQIRQLEK EVGRPLLIRT
TRSVRLTPQG EMILSSMGQV KADLLMLDKR IRHDNDDISG RISITAPSQL TQRHLLNICH
EFTQLHPQVH FSIDCSYTLH DLTRNDFDLA FRATATPPQN MVAKKLFDYQ QICCAAPAYL
QQHGTPDSIE DLHHHQCLTA TEQTHWTFNA QPILINSCLS VNDNHMLKQL ALLGRGIIVG
PEYLVDKEIQ AGTLQAILTT ETMNASTAYL IHPQLVQQSA RLSSFIQFTL NWFQQLNAQ
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