Gene Sfri_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0793 
Symbol 
ID4278710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp933803 
End bp934519 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content42% 
IMG OID638133561 
Producthypothetical protein 
Protein accessionYP_749486 
Protein GI114561973 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA TATTACTCAC AAGCATCATT TCTGCTTCAT TATTTACCTT AACCGCCACC 
AGCAGTTTAT CGACAGTGCA AGCGGCCGAG CTCAGTTTTG CTCATATTGA AACAGTGGGA 
ACAAGCACCA TTGAAGCTGC AGCAGACATG GCTATTATCA ATGTTCAAGT ATCTATAGAA 
GCCGATAGCG CTAAAGCCGC TAAAGACAAA GCCGACGAAG CCGTCAGCCA ATTTATGCAA 
CGATTACTCA AGGCTGGAGT CGACAAAAAA CACATTCAAA GTGCTAACTT ACAACTTAAT 
CCGCAATATA TGTATGTGCA AAATGAACCG CGTAAACTCA CGGGTTATAA CGCTAGCCGT 
CAAATGACCA TTACCGTAAT TGACCTTAAC AGCTTAAATG AATTACTCGA CAGCGCTTTG 
GTTGAAGGGA TTAATAACGT TAATAATATC GAACTAAAGT CGAGCCAAGA AACCAAAATC 
ATTGCTCAAG CTCGCCAAGC CGCGATTGAT GATGCCAAGC AAAAAGCTCA ATCTTTAGCA 
AAAGGCTTTG GTGAACAAAT TGCTGGGGTA TGGCAAGTAA GATACTTTCC GCAACAAGCC 
AATCAGCCAG AAATGTACCG CGCCAGCATG AAAATGAATG CCGATGTAGC GCAAACCTAT 
CAACAAGGCC AAGTCGCGAT TAGCGACAGA GTGGAAGTGG TTTTTAGATT GAAGTAA
 
Protein sequence
MNKILLTSII SASLFTLTAT SSLSTVQAAE LSFAHIETVG TSTIEAAADM AIINVQVSIE 
ADSAKAAKDK ADEAVSQFMQ RLLKAGVDKK HIQSANLQLN PQYMYVQNEP RKLTGYNASR 
QMTITVIDLN SLNELLDSAL VEGINNVNNI ELKSSQETKI IAQARQAAID DAKQKAQSLA 
KGFGEQIAGV WQVRYFPQQA NQPEMYRASM KMNADVAQTY QQGQVAISDR VEVVFRLK