Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0784 |
Symbol | |
ID | 4278701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 920452 |
End bp | 921420 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133552 |
Product | C4-dicarboxylate transporter/malic acid transport protein |
Protein accession | YP_749477 |
Protein GI | 114561964 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1275] Tellurite resistance protein and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGAG CGGTAAAACA AACACTAACG GCAGTTCCAA CCCCTATGGC TGGATTAGCG TTGGGAATTG CAAGTTTAGG TTGGAGTTGG GAAACCCTCG TTGATTTACA TCATTATAGT CAGTGGGTTG GGGCTGCCAT CGCAAGTGTA TTATTACTGA TTTTAAGTGC TAAATTTTTA TTACATTCAG ATTTATTACG CCAGGATCTT GCTCATCCAG TGGTCGGCAG CGTGGTACCT ACTTTTGCAA TGGCGTTAAT GGTGGTGTCG AATTCGTTGA GTTATGCCTC TGCACTCGCA GGTGATTTAT TATGGTCATT TGCAGTATTG CTGCACATCA GCTTTTTGGT CGGGTTTATT TATCATCGCA GTAAACAATT TTCACTGCAT CATATGGTGC CTAGCTGGTT TATTCCGCCC ATTGGTATTG TGGTGGCCGA TGTGTCGTTT TCAGGCAATA TTCATTTAGC GTGGGTTGCT CATGCTGCGC TAAACTTTGG CATGTTGAGT TATGCCATAA TGTTACCGAT GATGATTTAT CGTCTTATAT TTACAGAACA AATCCCAGAT GCAGCCAAAC CTACTTTAGC GATTTTAGCG GCGCCAGCAA GTTTATCTTT GGCGGGCTAT TTAACGGTAA TTGAACAACC ATCGCCGGTT ATTGTTGGGC TATTATTTGG TATTGGGGTG TTAATGACCT CGATTATCTA TCTATGTTTT TTCAAACTGA TGCGTTTACC CTTTAGCCCC GGCTATGCCG CGTTTACGTT TCCGATGGTG ATAGGGGCAA CGGCATTATT TAAAATGTCT GTTTGGATGG AAAGTGTTGG CATGGCAGCG GAATATGTAC AGCAAATTAA TGCATTAGCT GAATTTGAAT TGCTTGTCGC TACCGTGGTT GTCAGTTATG TTTGTCTGCG ATATCTGCAT TTTTATCAGC CAAGCAAAGT ATTGGCGGTG AATCCATAA
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Protein sequence | MIRAVKQTLT AVPTPMAGLA LGIASLGWSW ETLVDLHHYS QWVGAAIASV LLLILSAKFL LHSDLLRQDL AHPVVGSVVP TFAMALMVVS NSLSYASALA GDLLWSFAVL LHISFLVGFI YHRSKQFSLH HMVPSWFIPP IGIVVADVSF SGNIHLAWVA HAALNFGMLS YAIMLPMMIY RLIFTEQIPD AAKPTLAILA APASLSLAGY LTVIEQPSPV IVGLLFGIGV LMTSIIYLCF FKLMRLPFSP GYAAFTFPMV IGATALFKMS VWMESVGMAA EYVQQINALA EFELLVATVV VSYVCLRYLH FYQPSKVLAV NP
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