Gene Sfri_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0653 
Symbol 
ID4278174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp758599 
End bp759345 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content41% 
IMG OID638133410 
Producthypothetical protein 
Protein accessionYP_749351 
Protein GI114561838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00719508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAG GATGTTGTTG GTTCGACAAT ACACGACGTT TGTTGGTCGA TCAGACCACG 
GCAACTCAGT GGCATTTAAA TGATCACGAG TATTGGGTTT TGAGCCAGTT AGTCCAACAT 
CGTGGTCAAG TTGTTCCCTT ATCTATGCTT GAAACTGTGG CTATTTCAGG CGACTGTCCT 
CACCAATTAT CCCATGCTGA ACTACTCGAT ATTATCAGCA AAATTATCAA TTACATGTGT 
CAGCGCCATA CCAATCTTAT TGAATATGTA CCAGAACAGG GGGTGATTTT ATATACCACA 
GCCACCGCTA AGCGTACCAA AATATTGGAA CTACCTGAGC GGCTATTATC TTTAGGTCAG 
TATCTGTTTA TTATTGTAAT TCTATTAGGT GTGTTGTTAT TTGTTTACTC TAAGCTAAAC 
CCTCCGGAGT TTGCCCAGGC CGATGTATTG CGTCAAGTGT TGACCCCTGA TGGGCATATT 
GTTCAGCTAT TTGTATTTGG CAATAATAAT CAGCAAGATG CCATATTACA TGCGGACTGC 
TTATCATCGC AATTACGTCT TTGTCATAAT ATTCGCTGGG ATTCAATTCA CGTTGCTCTG 
TCTGCCAATC AAGATTATAT GAGTTTCACA TTGACCGACG CGAGTGAAAC GACACCATTA 
GTTAATAGCG TTAAAGTCAG TATCGATGAT ATGAGTACGC CATTTATCAC CCAGCAATGG 
CTACAAAAGG TACACATTTG TGGCTAG
 
Protein sequence
MQIGCCWFDN TRRLLVDQTT ATQWHLNDHE YWVLSQLVQH RGQVVPLSML ETVAISGDCP 
HQLSHAELLD IISKIINYMC QRHTNLIEYV PEQGVILYTT ATAKRTKILE LPERLLSLGQ 
YLFIIVILLG VLLFVYSKLN PPEFAQADVL RQVLTPDGHI VQLFVFGNNN QQDAILHADC 
LSSQLRLCHN IRWDSIHVAL SANQDYMSFT LTDASETTPL VNSVKVSIDD MSTPFITQQW 
LQKVHICG