| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0627 |
|---|
| Symbol | |
|---|
| ID | 4278427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 730761 |
|---|
| End bp | 731603 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638133384 |
|---|
| Product | ABC-type amino acid transport/signal transduction systems |
|---|
| Protein accession | YP_749325 |
|---|
| Protein GI | 114561812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.225445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATATC GGTCAATTTT TTTATTAAGC TTATTATTAA CTCTTTGCTA TCCCGCCATT
GCCACGTCCG TTGATCCAAT CGATGATGTA CACGAATTAG TCGAATTCCA CTCGCAAACT
TACCATGAAA AATTGATTCC AGTCATTGAT AGTATTAGTT TTTCTACCAG TAACAGTATT
GCACCTTATT TCTTTACCGA TGAAAATGCT GGCGTGCAGT ATGACCTTTT GAAGGCAGCT
CTGAACAGTG AAAATATAGA CATAAAAGAA ATTGTTCATG CGCCTAATTT ACGTGCACAG
CGTCTAGTTA AAACCAATAA AATAGACTGC ATGATCAATG CCCCTGATAA TGTGGAAGGA
CTGTTTTATA CGCAAAGCTT ACTTGAATAT AAAAATAGCG TGTTTTACTT ATCAAGAAAC
AACCTTCAAA TTGAACAATT TAACGATCTT AGCGCATTGT CTATTTTAGG ATTTCAAAAC
TCAAAACAAT ACTTAGGTGA TGAGTTTAAA GACATCGCGA ATGCTAACCC TCACTACAGT
GAAATAACCA ATCAAAAAAG CCAAGTGGTG ATGTTATTTA ATGGATATGT TGAAGTCATT
GTTTTAGAAA GACGGATATT TGAATATTAT CGTCATTTAC TCAAATCAAA ACTCGATACC
AGTATCCCAG TAACAGAAGT GGTATTGTTT GACCCTGCAC AACGAAAAAT TGCTTGTCAT
GATCAAATAA TAGCTAACCG AGTAGATAGT GCTATTACTA CACTCAAACA GTCATATCGC
TACCAAGAGA TACTCGACCT AGCTGAACAA AACAATTATC AACCACAGCA TCAAATGCCT
TAA
|
|---|
| Protein sequence | MKYRSIFLLS LLLTLCYPAI ATSVDPIDDV HELVEFHSQT YHEKLIPVID SISFSTSNSI
APYFFTDENA GVQYDLLKAA LNSENIDIKE IVHAPNLRAQ RLVKTNKIDC MINAPDNVEG
LFYTQSLLEY KNSVFYLSRN NLQIEQFNDL SALSILGFQN SKQYLGDEFK DIANANPHYS
EITNQKSQVV MLFNGYVEVI VLERRIFEYY RHLLKSKLDT SIPVTEVVLF DPAQRKIACH
DQIIANRVDS AITTLKQSYR YQEILDLAEQ NNYQPQHQMP
|
|---|
| |