Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0527 |
Symbol | |
ID | 4278660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 601572 |
End bp | 602792 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133285 |
Product | hypothetical protein |
Protein accession | YP_749226 |
Protein GI | 114561713 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTA ACTTACACCA AGCTGGGGTA AAGCTGCTCA AACAACTTGG GCGCCATGCC GATGTTGTCA TGGATGCATA TTTGGCTGGG TCGATTAACG ATACAGCCCA TGATGCTGGC GTTATCGAAA AACTGAAAAA AAGTGGCATT TTATGGCGAC CAGAACCGGA TCAAGAACTG CGCTTAAAGC GTTCGGTGCG GGCATTATTG GAAGAAGCAT TAAGCGACGA ACGTAATCGA CAGATTGATG CCAACGTCGG CTCAGCGCTA GCGACAATAA AAACCTTAGC CGATCATTAT AAAGAAGCGC GCCGTGATGT GGATTTCAGT GCTGCAGAAG CCTATTTAGC CGATTTAAAT GAACATGTGT ACAGCTTTAC CGACAGTTTA CGTTATTCAA TCCGGGTGTT ATGGAGCCGA ATTAATAACG AATTTGGTTA TGTTGGGACT ATAAGTGCCA AAATTCGCGA AAACGAATTA GCCCAAAGCC AGGTGTCAGA GCTGCTAAAC GGCTTAGAAA TGTTTCAATT TAGCGAGTTA GGTGAAATTG CTGGTGATAT CCGTGAATTG CGCCGTTTGT TGATGACCAG CTTGCAAGAA ACCTTAAGTC AATGTACTCA AGAGTTGAGT ATTGTCCAAG CGAGATTGTA TGAGTTACTA GGGCGATTTA GGCAAATACA AGGGCGCACC CGATTACTAA AAGGTTGGTT ACTGCACACC AACATGCATC CTGATTATCA ACCTGAAAAC CATGTAGTGC ATAAAGCGGT GCCGGTATTA TTTAATTGTG CTGAAGCGCT GATAGCCCCT GCAAGTGTTG ATGTGTCAAA CCCTCATCAC GAACTAGAGC TGATGGGGTT AGTGGCACAA GTTAAAGCCA TTAGTCGCGA CTCGTTACCT GCGGTACTTC GTGAGCACAA CGTGACCTTT GAAATGGGCG ACCGTGAGGA TTTCGATATC CCTGAAAATC CCCTTAAAAT AGCCGTGGAT GAATATTTTT GTGAAGTGAT TGATTCTGGT TTACGTCAAT CGGCATTAAG CTATTTGCAA GAGAAGCAAT TAACATGGGA TGCCGAAAGT TGGCTTTATC AAGTCATTGG CGGTTATGAA GGTTTAGCCG ATGAGCATAA AAATTACTTT GAGCTTGAAC CGATAGGTAA ACCTGATCCG GTTTATAGCG GTAACTTTAT CATTAACGAT GTTGAGTTAT GGCTAGCTTA A
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Protein sequence | MSSNLHQAGV KLLKQLGRHA DVVMDAYLAG SINDTAHDAG VIEKLKKSGI LWRPEPDQEL RLKRSVRALL EEALSDERNR QIDANVGSAL ATIKTLADHY KEARRDVDFS AAEAYLADLN EHVYSFTDSL RYSIRVLWSR INNEFGYVGT ISAKIRENEL AQSQVSELLN GLEMFQFSEL GEIAGDIREL RRLLMTSLQE TLSQCTQELS IVQARLYELL GRFRQIQGRT RLLKGWLLHT NMHPDYQPEN HVVHKAVPVL FNCAEALIAP ASVDVSNPHH ELELMGLVAQ VKAISRDSLP AVLREHNVTF EMGDREDFDI PENPLKIAVD EYFCEVIDSG LRQSALSYLQ EKQLTWDAES WLYQVIGGYE GLADEHKNYF ELEPIGKPDP VYSGNFIIND VELWLA
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