| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0521 |
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| Symbol | |
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| ID | 4278654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 591575 |
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| End bp | 592318 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133279 |
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| Product | putative spermidine synthase |
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| Protein accession | YP_749220 |
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| Protein GI | 114561707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT ATAAAGTATT GCATGTCGAC AGTGATAGTG TTGGTGATTT TTGTGTGCTC
GATGATGGTG ATTTTAGAGT GTTATCTTTT GGAGATAACG ACGAGCAAAG CAAAATGGAT
AAAGCCCAAC CACATGTGCC GCAGCATACT TATGTTCAGG CAATGCTTGC GGTATTATTA
TTTACTCAAC CTAAAAGTGT GATTATTTTA GGCTTAGGCG GCGGAGCATT AGTCCACTCG
CTTCGACATG TTGATGCCGC GATTAAAATT ACTGCAGTAG AGTTACGAGA AAGGGTAATT
GAGGTAGCCA AACGATTTTT TCAATTGCCA CTGGGTAAAA AATTGAACTT AGTTCATCAA
GATGCCAATG TCTTTTTGGC CAATGCAGAA CACAAAAAAG TCGATGTCGT TTTTGCCGAT
ATATACAGTA ACAAAGGTGT CGATAAGCAA CAGCTATCAA CGCTATTTAT TGGTCAGGCA
AAGCAACTTT TAAAAACGGA TGGTTTTTTA GTGCTTAATT GTTGGAAAGA GCATAGCCGT
GACACCCAAC TGCGTGACAC TCTTTATAGC CATTTTACCC ATGTTTATGC TTGTTTAACT
GGCGGTGGTA ATTGGGTTGT ATATGCCACT AATGGTCATA CTGGGTTTGC CGCCGCGAAC
AATAAGCAAG CCTTACAAGC ATTATCGCAA AAGCTCGATA CCAACATCAG CCGCGTATTA
ACTCGTTTTG GTATTTGGGA ATAA
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| Protein sequence | MSDYKVLHVD SDSVGDFCVL DDGDFRVLSF GDNDEQSKMD KAQPHVPQHT YVQAMLAVLL
FTQPKSVIIL GLGGGALVHS LRHVDAAIKI TAVELRERVI EVAKRFFQLP LGKKLNLVHQ
DANVFLANAE HKKVDVVFAD IYSNKGVDKQ QLSTLFIGQA KQLLKTDGFL VLNCWKEHSR
DTQLRDTLYS HFTHVYACLT GGGNWVVYAT NGHTGFAAAN NKQALQALSQ KLDTNISRVL
TRFGIWE
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