| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0499 |
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| Symbol | |
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| ID | 4278579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 565531 |
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| End bp | 566625 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133256 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_749198 |
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| Protein GI | 114561685 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATCA ATAAGCGGTT AGTGTTAGTG CCAAGTATTA TCGTTGTGTT AGTTGTTGCA
GGCGTTTATT GGTGGTCACA AGTTCGATAT ATCGAGTCAA CGGACAATGC GTATGTTGAG
GCTGATATTT CAAATATCAG TGTAAAAGTC CCCGGCTACA TTGTGCAGTC TACTGTGGTT
GATAATCAAC ATGTCAACAA AGGTGAACTA CTGGCTCAAC TGGAAGACAG TCAGTTTGTT
GCTAAGCTGG CTCAAAGCAA AGCTGTGCTA GCGAGTACCC AAGCAAACTT GCAAACCTTG
GCCGCAAAGG TTGATTTACA GCAAGCATTA ATTAACCAAG CTAAGGCAAC CGTTGTGGCC
TCACAGTCAG AGCAGTTAAT TGCTCAACAA CAGTTGAAGC GTTCACAGAA ATTAAAAATC
AGTAATTACA GTTCACAAAA TGATGTTGAC CAACTTCAGG CTGGTTTCGA TTCAGCATCA
GCTCATGTCG ATGAGGCGCA AGCTGCATTA GTGGCTAAGC AGCGTGAATT GTCGGTATTT
AACGCGCAAT TATTACAAGT ACAAGCGGAT GTCGATCAGG CAATGGCCAG TGTCGAGTTG
GCCAATATTC AATTGGTTGA TACACGTGTT ACGGCACCGT TTTCAGGGAT TATAGGTAAG
CGTGGCGCAA TGGTGGGCCA GTATGTTCAA CCTGGACAAG CATTGTTTAG CCTAGTGCCA
GATGCACAAG TGTGGATTAC GGCTAACTTT AAAGAAACTC AAATTGAGCA CATGCAAGCC
GGACAAGCCG TTAAGGTGAG TTTAGATGCT TATCCTGATT ATGTGTTTAG CGGATTTATC
GACAGTTTAG CACCTGCATC GGGTTCTAAA TTTAGCTTGT TACCCGCAGA GAATGCGACG
GGTAACTTTA CCAAAATTGT TCAACGTATT CCGGTGCGTA TTCGTCTTGA ACATGATCAA
CCCTCATCTG CAATTGGGCG TATTTTACCT GGCTTAAGTG CCTTGGTTGA AGTTGATACA
GAGTCAGCAA CTCAATCTCA TGAGCTTGCT AAGGCATCTG CTGTTCAAGC AACATCTGTG
ACTGCAGGGC ATTAA
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| Protein sequence | MSINKRLVLV PSIIVVLVVA GVYWWSQVRY IESTDNAYVE ADISNISVKV PGYIVQSTVV
DNQHVNKGEL LAQLEDSQFV AKLAQSKAVL ASTQANLQTL AAKVDLQQAL INQAKATVVA
SQSEQLIAQQ QLKRSQKLKI SNYSSQNDVD QLQAGFDSAS AHVDEAQAAL VAKQRELSVF
NAQLLQVQAD VDQAMASVEL ANIQLVDTRV TAPFSGIIGK RGAMVGQYVQ PGQALFSLVP
DAQVWITANF KETQIEHMQA GQAVKVSLDA YPDYVFSGFI DSLAPASGSK FSLLPAENAT
GNFTKIVQRI PVRIRLEHDQ PSSAIGRILP GLSALVEVDT ESATQSHELA KASAVQATSV
TAGH
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