| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0490 |
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| Symbol | |
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| ID | 4278554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 555821 |
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| End bp | 557320 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133248 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_749190 |
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| Protein GI | 114561677 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAT CGGCGTCGTT CAAACCGTCT TCATCGGAGC ACAAGCAACC CAGCTTACTT
GATGCACTTA TCCCCGTTTT TGCCCTTATT CTTATGCTCG CGGCAGCAGT TTATCTGTTT
TCTTCAGACA GTTCATCAGG CGCCAATCAA ATCGCATTAG TGTTAGCAGC ATGTATTGCG
ATGATAATCG GTTATAAAAA TGGTTATAGC TGGAATCAAA TGGAACGAGG TATCGTCAAA
AGTATTGGAG TGGCGACCGG TGCTTTATTA ATTCTATTCA GCGTAGGTTC GCTCATTGGT
ACGTGGATTT TAGCCGGTAC AGTTCCGACG ATGATTTATT ATGGTATGCA AATCCTTAAC
CCAGACTACT TTTATACTGC CTGCTGTTTA TTGTGTGCGG TGGTTGCACT GAGTATTGGT
AGCTCGTGGA CCGTTGCAGG TACCTTAGGT ATTGCCTTAG TCGGTATTTC GTCTGCTATG
GGACTAGACG TTAACATTAC TGCTGGCGCT ATTATCAGTG GCGCCTATTT TGGCGACAAA
ATGTCGCCAA TGTCTGACAC CACAAACCTT GCACCTGCTG TTGCGGGAAC GGACATTTTT
AGCCATATCC GCCACATGAC CTGGACCACT GTGCCGAGCA TTATCATTGC CCTTATTGGC
TTTACTTTTT TAGGCCTTAC AGCAGATGTC GTACCAATTG AAAATCAACT CGTAGATACA
TTGGCTTTAT TGGATAAAAC CTACAGCCCA GGAATACATT TATTGATCCC GTTATTAGTG
GTGTTGTATT TAGCTAACCG CAAAATGCCA GCGTTTCCAA CGGTCATATT AGGTACGTTA
GCTGGCGCGG TATGCGCTGC ATTATTTCAG TTTGATAACG TGATTGCCTT TGTACACGAC
GACACATTAT TGCCAATGGT CGCGTTAGTG AAAGGTTTAT GGATAGCCAT GTTTGACGGC
TATGTCGCTA ACACGGGCGA TGAGGTATTA GATAATCTAT TGAGTCGTGG TGGCATGAGC
AGCATGGTAA CAACGGTTTG GCTTATTCTG TGTGCGATGG CATTTGGCGG CGTGATGGAA
GTCACCGGAT TATTAAATCG TATTTTAGAA AGTATTCTTA CCGTCGTCAC TGGCACGGCC
AGCTTGATTA TTACTACTCT TGGTGTGTGT ATTGGCGCTA ACATCATTAC TGCCGATCAA
TATATTGCCA TTGTACTGCC AGGCAGAATG TTAAAGGTGG AATACACTCG CCGTAAGTTG
GCCGCAGTTA ATTTAAGCCG CACGTTAGAA GACTCAGCAA CAGTAACCAG CCCGCTAGTG
CCTTGGAATA CCTGTGGTGC CTTTATGGCC AGTACACTTG GCGTAGCCAC TATCGCTTAC
CTGCCTTATG CCTTCTTTAA CTTAGTTTGT CCGTTTATCA GTGCATCTTA TGCTTATTTC
AATTTCAAAA TTGAACCATT AGACGAAACT AAAATAAGCA CTGGCGAAGT CGTTGGTTAA
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| Protein sequence | MSQSASFKPS SSEHKQPSLL DALIPVFALI LMLAAAVYLF SSDSSSGANQ IALVLAACIA
MIIGYKNGYS WNQMERGIVK SIGVATGALL ILFSVGSLIG TWILAGTVPT MIYYGMQILN
PDYFYTACCL LCAVVALSIG SSWTVAGTLG IALVGISSAM GLDVNITAGA IISGAYFGDK
MSPMSDTTNL APAVAGTDIF SHIRHMTWTT VPSIIIALIG FTFLGLTADV VPIENQLVDT
LALLDKTYSP GIHLLIPLLV VLYLANRKMP AFPTVILGTL AGAVCAALFQ FDNVIAFVHD
DTLLPMVALV KGLWIAMFDG YVANTGDEVL DNLLSRGGMS SMVTTVWLIL CAMAFGGVME
VTGLLNRILE SILTVVTGTA SLIITTLGVC IGANIITADQ YIAIVLPGRM LKVEYTRRKL
AAVNLSRTLE DSATVTSPLV PWNTCGAFMA STLGVATIAY LPYAFFNLVC PFISASYAYF
NFKIEPLDET KISTGEVVG
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