| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0489 |
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| Symbol | |
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| ID | 4278553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 554447 |
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| End bp | 555787 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133247 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_749189 |
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| Protein GI | 114561676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGATC CGCTGATTAA CTCGCATCCT AATAATCAAA CGTTTGCCCC TAGCTATTGG
GCAAACACTC AAGCCTTACC CGCACCAGCT GCTGCATTGT CTGGCCGCCA ACAAACCGAT
GTGGCTATTG TGGGTGGTGG CTACACAGGC TTATTAACAG CCTATTATTT GGCAACCGAA
TTCAATATAG ATTGCCATGT GTTAGAGGCC AATCAAGTAG GTTTTGGGGC GAGTGCGCGC
AATGCTGGGT TTGTGTTAAA AGGATCGGGG CGTTTAGGGT ACGCCGCCAT GACTGAGCGT
TGGGACTTAG CAACGACCAA GGGCATATAC GATGAATTTA CCCAAGCCGT GGCTAGAGTC
GATGGGTTAA TTAAACAACA TAATATCGCC TGTGAACCGC AAGAAGCGGG CTACTTAAAG
GTGGCGCATA ATCCTAAAGC CTTAGTCACG CTGCAAAATG CCGCTAATTA TATTCAACAA
CACTTAGCCA GTAGCCAAGA CTCGGGCGCC GAGTTTATTT CAAGCCAAGA TTTTCGATCC
CAATATTTAG ATCATCATCA AGCTTTTGGT GCGCTGCGTT TAAAAGACGG TTTTGGTCTT
AATCCGCTTA AATTGTTATT AGGTTATAAG GACATGGTGC AAGCTCAAGG CGTGACTATT
TCTGAGCAAT CTTGCGTATT AGATTGGATT GAAGAGGGTG GTAAACATCG TTTAATTACC
GATAAAGGCG AACTGATTGC CAACAAAGTG ATTATGGCGG GTAATGCTTA TACGCCTAAA
CGGTTTAACC AGCGCATAGA CGATAAATTT TTGCCAATAT TAAGCAATGT GATTGTCACC
GAACCGCTTA CCGCGCAAGA GCTTGCAGAG GCGGGTTTGC ATACTCATCA AGTGACCATG
GATACCCGTA TTTTAAAATA CTATTACCGT TTATTACCCG ATAATCGATT GTTGTTTGGT
GGCCGTGGTG CGGTGTGGGG CAAAGATGCT GCGAATCCCG TTTATGGTGA GCGTTTAAAA
ATGGCGTTAA ATAAGTGCTT TCCAAGTTTA ACCAGTAAAG CTATTGCTTA TAATTGGACC
GGATGGATTG CTGCTGCAAT GGATGATATG CCCCATGTGT ATAGCAAAGA CGGCGTAGGG
TACAGCTTAG GATATTGTGG TGCGGGAGTG TCGTTTAGTA GCCAGGCTGC GTATCGCTTA
GCACAAAGTA TTGCCGGAGA AACATTACCC AATTTGCCTT TGTATCAACA ACCCTTGCCT
AAGTTTCCCT TCACCCAAGC AAGACGGCTT GGGCAATGGG GTTATTATCA TTATGGTTGG
TTAAAAGATC GTTTTGGTTA A
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| Protein sequence | MYDPLINSHP NNQTFAPSYW ANTQALPAPA AALSGRQQTD VAIVGGGYTG LLTAYYLATE
FNIDCHVLEA NQVGFGASAR NAGFVLKGSG RLGYAAMTER WDLATTKGIY DEFTQAVARV
DGLIKQHNIA CEPQEAGYLK VAHNPKALVT LQNAANYIQQ HLASSQDSGA EFISSQDFRS
QYLDHHQAFG ALRLKDGFGL NPLKLLLGYK DMVQAQGVTI SEQSCVLDWI EEGGKHRLIT
DKGELIANKV IMAGNAYTPK RFNQRIDDKF LPILSNVIVT EPLTAQELAE AGLHTHQVTM
DTRILKYYYR LLPDNRLLFG GRGAVWGKDA ANPVYGERLK MALNKCFPSL TSKAIAYNWT
GWIAAAMDDM PHVYSKDGVG YSLGYCGAGV SFSSQAAYRL AQSIAGETLP NLPLYQQPLP
KFPFTQARRL GQWGYYHYGW LKDRFG
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