| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0480 |
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| Symbol | |
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| ID | 4278544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 545723 |
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| End bp | 546772 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133238 |
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| Product | hypothetical protein |
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| Protein accession | YP_749180 |
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| Protein GI | 114561667 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
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| TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TGTACGGAGT TCAAGGCACA GGGAATGGCC ATATCAGTCG CGCACGCGTG
ATGTCTAAAG CGCTTAAGCA ACATAATATT GATGTCGATT TTCTATTTTC AGGCCGAAAA
CAACAACACT ACTTTGATAT GCAATGCTTT GGCGATTATC AGACCCGTAA TGGTATGACA
TTCATAACCG AAAATGGTCG AGTTAATTCC GTAAAAACCG CCAAAAACAA TTTAACTACT
CCTATTTTCT CTGAAATTAA GCAGCTAGAT TTAACGGGGT ATGACTTAGT ATTGAACGAT
TTTGAACCTG TGAGTGCTTG GGCGGCCAAA CAACAAAATA TTCCATCAAT CGCCATTAGT
CACCAAGCAG CATTACAATA TCCAGTCCCT AAGCAAGGCA ACAGTTGGTT TAATGAATTT
TTGCTTAACC ATTTTGCACC CGTCGATATT GCTTTAGGTT GTCATTGGCA TCATTTTGGC
TTTCCTATTT TACCTCCATT TGTAGAGGTG TGGCCCAATG GTGGTGATCA TAGCCATCAA
ATTTTAGTCT ATTTACCCTT TGAAGAGCCT GATCGTATAG CGGCATTTTT AGCCCCATTT
GATCAATACC ACTTTTCTGT TTACCACAGC ACTAAACCAT TGAAACCATT AGCAGAGCAT
GTTCATTGGC ATGGCTTTAA TCGTGAAGGC TTTAAACAGC ATATGGCTCA ATGTGGTGGG
GTGATCGGCA ATGCTGGTTT TGAGCTGGCC AGTGAAGCGA TGACGTTAGG TAAGAAGTTA
TTAGTAAAAC CGTTACTGGG GCAGTTTGAG CAGTCTGCTA ACGTTGCGGC GTTAGAATTA
CTTGCCGCGG CAGAAAGTAT GCAAACTTTA GATTTTGCCG TACTCAAGCG TTGGTTAAAA
AGCCCATCAC CTAAGCCTAT TGCGTACCCA CAAGTCGGCG ATGCATTGGT AGAGTGGTTA
AAAATGGGCG ATTGGCATCA GTCACAAAAT TTATGTCAAC ATTTATGGTC ACAAGTCGAG
TTGCCTGAAA ACTGGCATAA ACGGCAATAA
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| Protein sequence | MKILYGVQGT GNGHISRARV MSKALKQHNI DVDFLFSGRK QQHYFDMQCF GDYQTRNGMT
FITENGRVNS VKTAKNNLTT PIFSEIKQLD LTGYDLVLND FEPVSAWAAK QQNIPSIAIS
HQAALQYPVP KQGNSWFNEF LLNHFAPVDI ALGCHWHHFG FPILPPFVEV WPNGGDHSHQ
ILVYLPFEEP DRIAAFLAPF DQYHFSVYHS TKPLKPLAEH VHWHGFNREG FKQHMAQCGG
VIGNAGFELA SEAMTLGKKL LVKPLLGQFE QSANVAALEL LAAAESMQTL DFAVLKRWLK
SPSPKPIAYP QVGDALVEWL KMGDWHQSQN LCQHLWSQVE LPENWHKRQ
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