Gene Sfri_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0476 
Symbol 
ID4278540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp542349 
End bp543377 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content46% 
IMG OID638133234 
Productarginase/agmatinase/formiminoglutamase 
Protein accessionYP_749176 
Protein GI114561663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGCG CATTCACTCA GCAGCATTGC GATGCATTAT TAAATTTACG CCCTAATGAA 
ACCAAAATAG GCCAACAGGT TTATCTGGCA TCTGCTGAAC TGTCATTAGC GCAAAATGCC
CAACGGGCTA AATCTAGTGG CGCTCAGTTT GCCATTATTG CCATTGCAGA AGATGTGGGG
CCACGGGCCA ACCTTGGCCG AGGCGGGGCT GATGATGCCT TTATCGCTAG CATGAAACAG
TTGATCAATT TACAGTCCAA TCGATTTCTT AATGGTAACG AATGTGCCAT TTTAGGCCAA
ATCAGTCTTG ATACATCGTT ACCAACAACC GCTACCGTTG AACAATTACG CCAAGCAACC
GCACAACTAG ATGACATCGT TATTGCTGCT GTAAGTGAAA TCATGCAAGC AGGATTAGAA
CCCATCGTTA TCGGCGGCGG CCACAATAAT GCTTATGGTT TATTAATGGC AACAAAAGCC
ACTACAGGCC TACCTGTCGC AGCCGTCAAC CTCGATCCAC ACAGTGATTT TAGACCACGA
GAAGGTCGCC ACAGCGGTAA TGGATTTAGT TATGCCGCCG CCAATGGCGC CCTCGACCAT
TATCATATTC TCGGCTTGCA TGAATTAAAA AACAGCGAAG AAACCCTAGA ACAACTGAGC
CTATTTGGCG CCACATGGAA CAGTTTTCAA CAAATTTGGA TCCGGCGTGA ATTGTCGCTA
GAAACCGCAT TGAAACAAAT TGCTAAATCA TTAAATCAAA CCCAACTGCC AGTAGCATTA
GAGCTCGATG TCGATGCGAT TGCCAATATG CCCAGTAGCG CAGCGACTTT TGCCGGTATA
TCGATACTCG ATGCGTGCCA TTATGTGCAT TATATTGCTA AGCATTGTCC ATGCCGTTAC
GCCCATTTTG CTGAAACCGC TCCAGCATGT CATCACGCGG GGTTAGAAGC GGGTTACCGC
GATGCTGGTC AAGGTCTCAG TGAGTTAATT TATGCTTATC TTCAGGGTCG ATTAACCTGT
CTGAATTAG
 
Protein sequence
MFSAFTQQHC DALLNLRPNE TKIGQQVYLA SAELSLAQNA QRAKSSGAQF AIIAIAEDVG 
PRANLGRGGA DDAFIASMKQ LINLQSNRFL NGNECAILGQ ISLDTSLPTT ATVEQLRQAT
AQLDDIVIAA VSEIMQAGLE PIVIGGGHNN AYGLLMATKA TTGLPVAAVN LDPHSDFRPR
EGRHSGNGFS YAAANGALDH YHILGLHELK NSEETLEQLS LFGATWNSFQ QIWIRRELSL
ETALKQIAKS LNQTQLPVAL ELDVDAIANM PSSAATFAGI SILDACHYVH YIAKHCPCRY
AHFAETAPAC HHAGLEAGYR DAGQGLSELI YAYLQGRLTC LN