Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0458 |
Symbol | frdB |
ID | 4277071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 525201 |
End bp | 525926 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133216 |
Product | fumarate reductase iron-sulfur subunit |
Protein accession | YP_749158 |
Protein GI | 114561645 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAG CACGCACGTT AACTTTTTCA ATTTTTCGTT ATGATCCGCA AGAGCCTGGC GACAAACCTA AAATGGTGAC TTATAGCTTA ACAGAAGCAC CCGGTATGAC GGTGTTCATC GCGTTGAATC AACTACGCGA AACACAAGAC CCATCACTAC AATTTGATTT TGTTTGTCGC GCGGGTATTT GCGGCAGTTG TGCGATGGTG ATTAATGGTT TCCCTACGTT AGCTTGTCGA ACTTTAACCG CTAATTATCC AGATGGACAT ATTAAATTAA TGCCATTACC TGGCTTTGAT TTAATTGGCG ATCTGTCGGT GAATACCGGT AAATTTATGC GCGAATTATC TGAGCGTTTG TCGCTGTGGT TGCATCCTAA TAGCGCAGAT AATGATATTC ATCGTATAGA AGCGCCGATG TCACCAGAGG AAGCCACTAA GCTTTATGAG TTAGAGCGAT GTGTAGAATG TGGTGTATGT GTCTCTGCTT GTGCGACTAA ACAAATGCGT GACACTTTTG TTGGCGCAGT AGGTATGATG AAAATTGCCC GTTTTGAATT AGACAGCCGT GATACTCGAA CCGCTGATGA TTTTTACCAT GTGATTGGTA ATCAAGATGG TGTGTTTGGT TGTATGACGT TACTCGGCTG TCAAGATACT TGCCCAAAAG ATTTACCGCA TATGCAGCAA ATTGCGTATT TACGCCGGAA AATGGCATCT GTTTAG
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Protein sequence | MSQARTLTFS IFRYDPQEPG DKPKMVTYSL TEAPGMTVFI ALNQLRETQD PSLQFDFVCR AGICGSCAMV INGFPTLACR TLTANYPDGH IKLMPLPGFD LIGDLSVNTG KFMRELSERL SLWLHPNSAD NDIHRIEAPM SPEEATKLYE LERCVECGVC VSACATKQMR DTFVGAVGMM KIARFELDSR DTRTADDFYH VIGNQDGVFG CMTLLGCQDT CPKDLPHMQQ IAYLRRKMAS V
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